Trichechus manatus latirostris (Florida manatee): 101353118
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Entry
101353118 CDS
T05135
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04080
Neuroactive ligand-receptor interaction
tmu04082
Neuroactive ligand signaling
tmu04723
Retrograde endocannabinoid signaling
tmu04727
GABAergic synapse
tmu04742
Taste transduction
tmu05032
Morphine addiction
tmu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101353118
04082 Neuroactive ligand signaling
101353118
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
101353118
04723 Retrograde endocannabinoid signaling
101353118
09157 Sensory system
04742 Taste transduction
101353118
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
101353118
05033 Nicotine addiction
101353118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101353118
Ion channels [BR:
tmu04040
]
Ligand-gated channels
GABA-A
101353118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
101353118
NCBI-ProteinID:
XP_004390677
UniProt:
A0A2Y9ECL0
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MVSAKKVPAIAMSAVVSFALLRFLCLAACLNESSGQNQKEEKLCPENFTRILDSLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVNFP
MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQMEKAKRKTSKPLQ
EIPSVPVLRGKHPEVPLQSMDANLNMRKRTNALVHSESDVGDRTEVGNRLSRSSTVVQGS
SGTTSKSYLASSPNPFSSANAAETISAARALPPTPPSTLAGTGHAPQQASVGSASTHRVF
GSRLERIKTTVNTIGASGKLSATTPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWV
VYLSKDTMEKSESLM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggtgcccgcgatcgcgatgtccgcagtggtcagtttcgccctc
ctgcgcttcctgtgcctggcggcttgtttaaacgaatcctcaggacagaaccaaaaggaa
gaaaaattatgcccggaaaattttacccgcatcctggacagtttactcgatggttatgac
aacaggctgcgtcctggatttgggggtcctgttacagaagtcaaaactgacatatatgtt
accagctttggacctgtttctgatgttgaaatggaatacacaatggatgtcttcttcagg
cagacatggattgacaaaagactaaaatatgatggtcccattgaaattttgcgattgaat
aatatgatggtaacaaaagtatggacccctgatactttcttcaggaatggaaagaaatct
gtctcacataatatgacagctccaaataagctttttagaattatgagaaatggcactatt
ttatacacaatgagactcaccataagtgcggagtgtcccatgagattggtgaatttcccc
atggatggtcatgcatgtcctttgaaatttgggagttatgcatatccaaagagtgagatg
atctatacctggacaaaaggtcctgagaaatcagtagaagttccaaaggagtcttccagc
ttagttcagtatgacttgattgggcaaacagtatcaagtgaaactatcaaatctattacg
ggtgaatatattgttatgacggtttatttccacctcagacggaagatgggttattttatg
attcagacgtacatcccatgcattatgacagtgattctttctcaagtttcattctggata
aataaggaatcagttccagctaggactgtatttggaataaccacagtcctcaccatgacc
acactgagcatcagtgcaagacattctttgcccaaagtgtcctatgctactgccatggat
tggttcatagctgtttgctttgcttttgtattttcggcccttattgagtttgctgctgtc
aactattttaccaatgttcaaatggaaaaagccaaaaggaagacatcaaaacccctccag
gaaattccatctgttccagtgctgagaggaaaacatccagaagtacctctgcagagcatg
gatgctaatttgaacatgagaaaaagaacaaatgccttggttcactctgaatctgatgtt
ggtgacagaactgaggtgggaaatcgtttgagcagatcttccacagttgttcagggatct
tctggaaccacatcgaagtcttacttagcttccagtccaaatccattcagcagtgcaaat
gcagctgaaactatatctgctgcaagagcacttccacccactcctccttccactcttgct
ggaactgggcatgcaccccaacaagcatcagttggatctgcttctactcaccgtgtgttt
ggatcaagactggagcggattaagaccacagttaataccataggggcttcaggaaagttg
tcagccactactcctccctctgctccaccaccttctgggtctggcacaagcaaaatagac
aaatatgcccgtattctctttccagtcacatttggggcatttaacatggtttattgggtt
gtttacttatctaaggacactatggagaaatcagaaagtctaatgtag
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