Trichechus manatus latirostris (Florida manatee): 101353279
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Entry
101353279 CDS
T05135
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101353279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101353279
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101353279
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101353279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
101353279
NCBI-ProteinID:
XP_004370044
UniProt:
A0A2Y9D8S8
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVVSVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccccgtgaggtactgcatacctggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggcacctacacccggcacgggtacatcttctcgtcgcttgccggctgt
ctgacgaagagcagcgagaacggcgcgcttcctgtggtgtctgtgatgagagagacagaa
tctcaactgctgccagatgtgggggctattgtaacctgtaaggtctctagcatcaattcg
cgctttgccaaagtacacatcctttatgtggggtccacgccacttaagaactcttttcga
ggaactatccgcaaagaagatgtccgagctactgaaaaagacaaggttgaaatttataag
agtttccgcccaggtgacattgtcttggccaaagtgatctctctgggtgatgcacagtcc
aactacctgctgaccactgctgaaaacgagctcggtgtggtggtggcccacagtgagtca
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccctaaaacccacactaaa
gaattccggaaagtggcacgagtacagcctgaattcttgcagacctaa
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