Trichechus manatus latirostris (Florida manatee): 101353479
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Entry
101353479 CDS
T05135
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03082
ATP-dependent chromatin remodeling
tmu04714
Thermogenesis
tmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101353479
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101353479
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101353479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101353479
03036 Chromosome and associated proteins [BR:
tmu03036
]
101353479
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101353479
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101353479
PBAF complex
101353479
GBAF(ncBAF) complex
101353479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
101353479
NCBI-ProteinID:
XP_004374275
UniProt:
A0A2Y9DHK6
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGSAVAAALGAPPPSAGPGMLPGPALRGXXXXXXXXXXGAAAFR
PMGPAGPATPYQRPGMSPGSRMPMAGLQVGPPATSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQPQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcgtggcgcgggcgggttcccgctgcccccgctgagccccggcggcagcgca
gtagccgcggccctgggggcaccgcctccctccgcgggacccggcatgctgcccggaccg
gcgctcaggggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctggggccgccgccttccgc
cccatggggcccgcggggcccgcaacgccgtaccagcggccaggcatgtcaccagggagc
cggatgcccatggccggcttgcaggtgggaccccccgccacctccccatttggcacagct
gctccacttcgccctggcatgccacccaccatgatggacccattccgaaaacgcctgctc
gtgccccagccccagcccccgatgcctgcccagcgccgggggctgaaaaggaggaagatg
gcggataaggttctacctcagcgaattcgggagcttgtccccgagtctcaggcgtatatg
gatctcttggcttttgagcggaagctggaccagaccatcgctcgcaaacggatggagatc
caggaggccatcaaaaagcctctgacgcaaaagcgaaagcttcggatctatatttccaat
acgttcagtcccagcaaggctgaaggtgatagtgcaggaactgcagggaccccaggagga
accccagcaggggacaaggtggcttcctgggaactccgagtggagggaaaactgctggac
gatcctagcaaacagaaaaggaagttttcttcattctttaagagccttgtcattgagctg
gacaaggagctgtatgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggaaacagatggcttccaggtgaagcggcctggagacctcaacgtcaagtgcaccctc
ctgctcatgctggatcatcagcctccccagtataagttggacccccgattggcaaggctg
ctgggagtgcacacacagacgagggctgccatcatgcaggccctgtggctttacatcaaa
cacaaccagctgcaggacgggcacgagcgcgagtacatcaactgcaaccggtacttccgc
cagatcttcagttgtggtcgactccgtttctccgagattcctatgaagctggctgggttg
ctgcagcatccagaccccattgtcatcaaccatgtcattagtgtggaccctaatgaccag
aagaaaactgcctgctatgacattgatgtggaggtggatgacccactgaaggcccagatg
agcaacttcctggcttctaccaccaatcagcaggagatagcctcccttgatgtcaagatc
catgagaccattgagtccatcaaccagctgaagacccagagggatttcatgctcagcttt
agcactgacccccaggacttcatccaggaatggctccgttcccagcgccgggacctcaag
atcatcacggatgtgattgggaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaagaagcagtggggaggcacatctttgccaaggtgcagcagcgcaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
DBGET
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