Trichechus manatus latirostris (Florida manatee): 101353588
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Entry
101353588 CDS
T05135
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tmu03037
]
101353588
Cilium and associated proteins [BR:
tmu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
101353588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Nup54_57_C
ATG16
VRR_NUC
Motif
Other DBs
NCBI-GeneID:
101353588
NCBI-ProteinID:
XP_004384568
UniProt:
A0A2Y9E1W7
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MSARAMRPRSRRGRHPPPGELDPVAESSEEAEVATGNLQPGPVPPQESHGESELLGPAAE
AGGQDMGSRTDKELDANSGWGVATAIEGSQEPTEEAHQAPEVAPQDGETVLPRPGFPDVF
QTLQHALSSLEAAAAAWRQQPPSCPGPMEADSGSEGAAGPLRGQEEAGGCQREAARLTER
NAWLQLALDSREDELARTQASLQAMQAEKEMLQREVQELQGSLLRLEHFPSPSHNQVGSS
GSGSSSPGAEGEAWGTQDHLPLAHPLLLRLRSDSSTRILAPEMHIMEAQIDQLRGSIEKL
KCFNRLLSAVLQGYKGRCEGLSMQLGQREAEATALHLALQYSESCAEAYGALLALRKADL
GAAEGASVGDLQAAEKEAWRLLAQEEAATDGGAPRDAQPSPEGSSVDRPTLQEVVTQLRS
YIQRLQEHSALVKIPLEPGPTLAPMSNVPQAEAMLQAMLETQPGPALPRLEKMQIQQDLA
TTRETLADLTLRLQLARREKRGLELREAALRVLGPVHLLLLEQLRWERAQLQTGEEDSSG
GDSSGGGSSGGEEEWAQGPPAVPGGTCGIDGGQVGRVQDPEELAQELEASLTRALDLQGQ
LQSLRKELEQVAQKSRARRTQSAKLNSDLCKAHSALVLAFRGAQRKQEEQQRKLEQQVAL
MEAQQAEELAVLETALRASGRPQPPRLPPRLGETLL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccgggccatgcggccccgaagtcggcgagggagacatcctccacccggtgag
ttggaccctgtggctgagagttcagaggaggcggaggtggccaccgggaaccttcagcca
ggccctgtaccaccccaggagagtcatggcgagtcagagctgctgggacctgcagcagag
gctggtgggcaggacatggggagcaggacagacaaggaacttgatgcaaactctggctgg
ggagtggccacagccattgagggctcccaggagcctacagaagaagcccaccaagcccca
gaggtagccccacaggatggggagactgtcctccccaggcctggattccccgatgtgttc
cagaccctccagcacgctctgagctccctggaggcagcggctgctgcatggcgccagcag
ccccccagctgtcctggcccaatggaggcagacagcgggagcgagggggcagcagggccc
ctcagggggcaggaggaggcagggggctgccagcgggaggcagcccgcctgacagagagg
aacgcctggctgcagctggccctggacagccgtgaggacgagctggcccgcacacaggcc
tccctgcaagccatgcaggcggagaaggagatgctgcagagagaggtccaggagctgcag
ggttccctgctgagactcgagcacttcccatctccctcccacaaccaagtgggcagctca
ggcagtggttccagcagccctggggcagagggagaggcctgggggactcaggaccacttg
cctctggctcaccccctgctcctgcgcctccggagtgattccagcacccggattcttgcc
cctgagatgcacatcatggaagcccagattgaccagcttcgggggagcatcgagaagctc
aaatgcttcaaccgtctgctatcggccgtgctccaggggtacaagggccggtgtgagggt
ctcagcatgcagctgggccagcgggaggctgaggccacagccctgcacctggccttgcag
tacagtgaaagctgtgcggaggcatatggggccctgcttgctctgcggaaggccgacttg
ggagcagcggaaggagcctcggtgggtgacctgcaggcagctgagaaggaagcatggagg
ctgctggcacaagaggaggctgccacagatggaggagcaccacgggatgcccagccaagc
cctgagggcagcagtgtggacaggcccacactacaggaggtggttacccagctccgcagc
tacatccagcggctccaggagcacagtgctctggtgaagattcccctggagcccggtccc
accctggcacccatgtccaatgtgccccaggcagaagccatgctgcaggccatgttggag
acccagcctggtccagctctaccccgactggaaaagatgcagatccagcaggacctagca
accacacgggagaccctggcggacctgacactacggctacagctggcgcgccgggagaag
cggggcctggagctgcgggaggctgcccttcgtgtcctgggcccggtccacttgctcctg
ctggagcagctgcggtgggagcgggcccagctccagactggcgaggaggacagcagtggt
ggagacagcagtggaggcgggagcagcgggggcgaggaggaatgggcccaaggccctcct
gctgtccctggtggcacttgtggcattgatggaggccaggtgggcagggtgcaggaccca
gaggagctagcccaggagttggaggcatcgctcacccgggctctggacctgcaggggcag
ctgcagagtcttaggaaagagctggaacaggtggctcagaagtctcgagccagacgcact
cagagtgccaagctgaacagtgacttatgcaaagctcacagcgccctggtcctggccttc
cgaggagcacaaaggaagcaggaggagcagcagcggaagctggagcagcaggtggcacta
atggaagcccaacaggcagaggagctggctgtgctggaaaccgctttgagggcttcggga
aggccccagccgccccgcctgccaccccggctgggggagacccttctgtag
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