Trichechus manatus latirostris (Florida manatee): 101353665
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Entry
101353665 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101353665
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101353665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
101353665
NCBI-ProteinID:
XP_012412328
UniProt:
A0A2Y9FY57
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MEAEEERFPRLRQVLLLFVLLAQTCAKQGGSYIVAEETERGSFVANLAKDLGLGVRELAW
RRAWVISKDHKKHFQLNVQTGDLQVNEKLDREELCGPTDPCVLQFQMLLEEPLEVYRFKL
LVSDINDNSPVFPEAEMILKILENSFPRSVFPLQNAQDLDIGINIQNYTIYPNSHFHVLT
RNGSEGRKYPELVLDKALDREEQRELRLTLMAVDGGAPPKTGTALILIDVVDVNDNVREF
EQPLYHVQIPENSPLGSLIVTVSARDLDTGINGEIFYSFFYGDEEIAKTFALNELTGEIQ
IIRTLDIEKIVSYEVNVKASDRAGPSGKCTVIIRVVGINDNIPELTVASLMSPIPENSPE
TTVALFSIQDRDSGENGRMVCSIQEDIPFTLKPTVENFYRLVTEGALDRESRAEYNITIT
VSDFGSPRLKTEHRITVLVSDVNDNAPTFTQTSYTLFIRENNSPALHMGSVSATDRDSGT
NAQLTYSLLPPQDPHFLLTSLISVNADNGHLFALRSLDYEALRAFEFRVGATDAGSPALS
SEALVRVVVVDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAWL
SYQLLKATEPGLFSVWAHNGEERTARLLSERDAAKHRLVVLVKDNGEPPMSASITLHVLL
VDGFSQPYLQLPEVAPDEAQADSLTVYLVIALASVSSLFLFSVLLLVTVCLCRRNRASWV
GRCSVPEGHFPGHLVDVSGTGTLSQNYQYEVYLARSSGTSEFKFKRATNDVEENSNFENG
FGFN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgaagaggagcgctttcctagactaaggcaagttctgcttctctttgttttg
ctggctcagacttgcgccaagcagggaggcagctatattgtggcagaagaaacagagaga
ggttcttttgtggccaatctagcaaaggacctagggctaggggttagagagttggcctgg
cggagggcttgggtcatttctaaggatcacaaaaaacattttcaactgaatgttcagact
ggagatttgcaagtaaatgagaaactagatcgggaagaactatgcggccccactgatcct
tgtgtgctgcaattccaaatgttactggaagaacctttggaggtatataggtttaaactt
ttggtcagtgacataaatgacaattcccctgtgttcccagaagcggaaatgattttgaaa
atcttggaaaatagttttcccaggtctgtatttcccctgcagaatgcacaagatttagac
ataggcatcaacattcaaaactacaccatctacccaaattcccatttccatgttctcacc
cgcaatggcagtgagggcagaaaatacccggagttggtgttggacaaagccctggatcgt
gaggagcagcgtgagctcaggttaactctcatggcggtagatggaggggctcctcccaag
actggaactgccctgatcctcattgatgtcgtagatgtcaacgacaatgtccgtgagttt
gagcagcccctctatcatgttcagattcccgaaaacagccccctcggatcccttattgtc
actgtttccgccagagatttagacacaggaataaacggtgaaatattctactcatttttt
tatggtgatgaagagattgccaagacatttgcacttaatgaactcactggagaaattcaa
ataatcagaacactagatattgaaaaaattgtgtcatatgaagtgaatgttaaggcctct
gatagggcaggtccttctggaaagtgcactgtcatcatacgagtggtgggcataaacgac
aacatcccagaacttactgtggcttcacttatgagccccatcccggaaaattcccctgag
accacagtagctcttttcagtattcaagaccgagactctggagaaaatggaagaatggtt
tgttccatccaggaagatattcccttcacactgaaacctaccgttgaaaatttctacagg
ctggtgacagaaggagcactggacagagagagcagagccgagtataacatcaccatcacg
gtcagcgatttcgggtcccccaggctgaaaaccgagcacagaataacagtgctggtctcc
gacgtcaatgataacgcacctactttcacacaaacctcctacaccctgttcatccgagaa
aacaacagccccgccctgcacatgggcagcgtcagcgccacagacagagactcaggcacc
aacgcccaactcacctactcgctgctgccgccccaggacccgcatttccttctcacctcc
ttgatctccgtcaacgctgacaacgggcacctgttcgctctcaggtcgctggattacgag
gctctgcgagcgttcgagttccgcgtgggcgcgacagacgcaggctccccggcgctgagc
agcgaggcgctggtgcgcgtggtggtcgtggacgacaacgacaactcgcccttcgtgctg
tacccgctgcagaacggctctgctccctgcactgagctggtgcccagggcagccgaggcg
ggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctggctg
tcctaccagctgctcaaggccacggagcccgggctgttcagcgtgtgggcgcacaatggc
gaggagcgcaccgccaggctgctgagcgagcgcgacgccgccaagcacagactcgtcgtg
ctggtcaaggacaatggcgagccgccaatgtcggccagcatcacgttgcacgtgctcctg
gtggacggcttctcacagccctacctgcagctccctgaggtggccccggacgaggcccag
gccgactcgctcaccgtctacttggtcattgcgttggcgtcggtctcgtcgctcttcctg
ttctctgtgctcctgttagtcacggtgtgtctgtgcaggaggaacagggcctcctgggtg
ggtcgctgctctgtgcctgagggccactttccgggccacttggtggacgtcagcggcact
gggaccctgtcccaaaactaccagtatgaagtctatctggcaagaagctctggaacaagc
gagttcaagttcaagagggctacgaatgacgtagaggaaaattccaactttgaaaatggt
tttggattcaattaa
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