Trichechus manatus latirostris (Florida manatee): 101354004
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Entry
101354004 CDS
T05135
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
101354004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101354004
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
101354004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
101354004
NCBI-ProteinID:
XP_023588463
UniProt:
A0A2Y9RA38
LinkDB
All DBs
Position
Unknown
AA seq
2173 aa
AA seq
DB search
MSSSFVPNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGEDPNFADLIHHDLSDEEDGLWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLNEEHITLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISSCLKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSASCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWVKFSSVSDGFNSDST
SHHGGKIPRKLATHVVDRVWQECNMNRAQNKRKYSASSGGLCEEETADKVASWDFVEVTQ
RTNCSCSRHKNLKPRNPGQQGQAPSLGQQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRV
SVSDDVSMDTDSASQRLVMSAPDSQVRFSNIRTNDVAKTPQMHGTEIANSPQPPPLSPHP
CDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPSKPMEDRIDSLSQSFPAQFQEAVEPTVYV
GTAVNLEEDEANIAWKYYKVPKKKDVEFLPPQLPSDKFKDDPVGPFGQESVTSVTELMVQ
CKKPLKVSDELVQQYQIKNQYLSAIASDAEQESKIDPYAFVEGDEEFLFPDKKDRQNSER
EAGKKHKVDDGTSSVTVLSHEEDAMSLFSPSIKQDAPRPTSHARPPSTSLIYDSDLAVSY
TDLDNLFNSDEDELTPGSKKSVNGSDDKSSCKESKAGNLDPLSCISTADLHKMYPTPPSL
EQHIMGFSPMNMNNKEYGSMDTTPGGTVLEGNNSNIGAQFKIEVDEGFCSPKPSEIKDFS
YVYKPENCQVLVGCSMFAPLKSLPSQCLPPIKLPEECIYRQSWTVGKLELLHSGPAMPFI
KEGDGSTMDQEYGPAYTPQTHTSFGMPPSSAPPSNGGAGILPSPSTPRFPTPRTPRTPRT
PRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSES
VMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGL
FLEDELDIIGRNTECGKEAEKRFEALRATSAEHVNGGLKESEKLPDELILLLQDQCTNLF
SPFGAADQDPFPKIGVISNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKSSC
LHPWSKRNVVDVSMQCSQDILRMLLSLQPILQDAIQKKRTVRPWGVQGPLTWQQFHKMAG
RGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPEN
EALLNGAKSFFRDLTAIYESCRLGQHRPISRLLTDGIMRVGSTASKKLSENLVAEWFSQA
ADGNNEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVVPASQSLITPPQMTNTGN
ANTPSTTLASAVSNTMTLTSGGAMSSSVATANSTLTTTSASSSSSSSLNSGVSSNKLPSF
PPFGSMNSSAAGSMSTQTTTVQNGQLGGQQASALQTAGISGESSLLTTQPHPDVSESTMD
RDKVGIPTDGDSHAITYPPAIVVYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLP
PHIKSTVSVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGF
GPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSH
DQRWILASCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLIQMSSLPW
RVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAME
PQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTT
ENLDLAFNPNNDGIGIFDLLDTPDDLDPDIISILPASPTVSPVHSPGSHYPHGGDTGKGQ
GTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLH
LHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFV
VLNQLYNFIMNML
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccttcgtgccgaacggggccagcctggaagactgtcactgtaaccttttc
tgcctggctgacttgacgggaattaaatggaaaagatatgtatggcaaggcccaacttct
gcccctattctgtttccggtgactgaggaagaccccattttgagcagttttagtcgatgc
cttaaggcagatgtacttggtgtttggcggcgagatcaaagacctggaagaagagagttg
tggatattttggtggggtgaagaccctaactttgctgaccttattcatcatgacttatca
gacgaggaagatggactatgggagaatggactttcttatgaatgccgtactctccttttc
aaagcagttcacaatctgttggagcggtgtttaatgaaccggaactttgtacgtattggc
aagtggtttgtaaaaccttatgaaaaagatgaaaaacctataaataaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcaacctgtgtaccttcttaatgaagagcatatcacccttgctcaacagtct
aatagcccatttcaagttatcttaagcccatttggactaaatggcactctcacaggacag
gcattcaagatgtctgattcagctacaaaaaaattgattggtgaatggaaacagttctat
cctatctcatcttgcttgaaggagatgtctgaagaaaaacaggaagatatggattgggaa
gacgattctttagctgcagtggaagttcttgttgctggtgttcgaatgatctacccagct
tgctttgttctagtccctcagtcagacattcctactcctagctctgtgggatcctctcat
tgttcagcttcttgcttgggtgtccaccaagtgcctgcttccacaagagatcctgctatg
tcttcggttactcttacaccacctacatctcctgaggaagtccaaacagttgatccccag
tctgcccagaagtgggtaaaattttcttcagtatctgatggcttcaactctgatagtact
agccaccatggtgggaaaatacccagaaaattagcaactcatgtggtggatagagtttgg
caagaatgcaatatgaacagagcacagaacaagaggaagtattcagcttcatctggtggt
ctttgtgaagaggagacagccgataaagtagcatcctgggattttgttgaagtcacacaa
agaacaaattgcagctgttcaaggcacaaaaatctcaaaccaagaaatcctggacagcaa
ggacaggcaccatctttaggtcagcaacagcaagtacttcctaagcacaagaccaatgag
aagcaagaaaagagtgaaaaaccacagaaacgccccttgactccttttcaccatcgtgtg
tctgttagtgacgatgttagcatggacacagattcagctagtcaaagacttgtgatgtct
gctcctgacagtcaagtgagattttcaaacatccgaactaatgatgtagcaaagactcct
cagatgcatggcactgaaatagcaaattcacctcaaccacccccactcagtcctcatcca
tgtgatgtggttgatgaaggagtgactaaaacaccttcaactcctcagagtcagcatttt
tatcaaatgccaacaccagatcccttggttccttctaaaccaatggaagataggatagac
agtttatctcagtctttcccagctcaattccaggaagctgtagaacctacagtatatgtt
ggtacagcagtaaacttggaagaagatgaagctaatatagcctggaagtattacaaggtc
ccaaagaaaaaagatgtagagtttttaccacctcaacttccaagtgataaattcaaggat
gatccagttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcaa
tgtaagaaacctttgaaagtttctgatgaactggtgcagcaatatcaaattaaaaatcag
tatctttcagcaatagcatctgatgcagaacaagaatctaaaattgacccatatgcattt
gttgaaggagatgaggagttcctttttcctgataagaaagatagacaaaatagtgagaga
gaagctggaaaaaaacacaaggtagatgatggaacatctagtgtaacggtgttatcacat
gaagaagatgcaatgtcattgtttagtccctctatcaagcaagatgctccacgccctact
agtcatgcccgtcctccatcaaccagtttgatttatgattcagacctggctgtctcttac
actgaccttgataatctcttcaattctgatgaagatgagctaacacctggatctaaaaaa
tcagtgaatggatcagatgataaatccagctgcaaggaatcaaaggcaggaaatctggac
ccattatcttgcataagcactgcagatcttcataagatgtatcctacaccaccatcattg
gaacagcacattatgggattttctccaatgaatatgaataataaggaatatggtagtatg
gatacaacacctggaggaactgttctagaaggaaataattctaatataggagcacagttc
aaaattgaggttgatgagggattctgtagcccaaaaccttctgaaattaaggatttttct
tatgtctataagcctgaaaattgtcaagttttagtgggatgttccatgtttgcacctcta
aaaagtctaccaagccaatgcctgcctcctatcaagttaccagaagagtgtatttaccgt
cagagttggactgttggaaaattggaattgcttcattcagggcctgcaatgccattcatc
aaagagggtgatggaagtactatggatcaagaatatggccctgcttatacacctcaaact
catacttcttttgggatgcctcctagcagtgcacctcctagtaacggtggagcaggaatt
cttccttctccatccacccctaggtttccaactccaaggactccaaggactcctcggact
cctcgtggagctggtggacctgctagtgctcaaggttcagtcaaatatgaaaattcagac
ttgtattcaccagcttctaccccatccacatgcagaccccttaattctgttgaacctgca
actgtcccttccatccctgaagcacacagtctttatgtaaacctcatcctttcagaatca
gttatgaatttgtttaaagattgtaactttgatagttgctgtatctgtgtctgcaatatg
aatatcaagggtgccgatgttggagtttacattccagatccaacgcaggaagcccagtat
aggtgtacctgcggcttcagtgctgtcatgaacagaaaatttggaaacaattcaggatta
tttcttgaagatgaactagatatcataggacgcaatacagaatgtggcaaagaagcagaa
aaacgttttgaagctctcagggcaacctctgctgaacatgttaatggaggactaaaggaa
tctgaaaaattgcctgatgagttgatattattgctacaagatcagtgcactaatttattt
tcaccctttggagcagcagaccaagatccttttcccaaaattggtgtcattagcaattgg
gtacgagttgaagaacgggactgttgcaatgactgctaccttgcgttagaacatgggcgt
cagttcatggataatatgtcaggaggaaaagttgatgaagcacttgtgaaaagttcatgc
ttacatccctggtccaaaagaaatgttgtagatgtgagtatgcagtgctcacaggatata
cttcgaatgctcctatctcttcagccaattcttcaggatgctattcagaaaaaaagaaca
gtaaggccttggggggttcagggtcctctcacttggcaacaatttcataaaatggctggc
cgaggctcttacggaactgatgaatccccggaaccactgccaattcccacgtttttgttg
ggttatgattacgattttctggtgctttctccatttgctctcccttattgggagagactt
atgctggaaccctatggatctcaaagagatatagcctatgttgtactatgtccagagaat
gaagctttgttgaatggagccaaaagcttttttagagatcttactgcaatatatgagtcc
tgtcgattgggtcaacatagacctatttcacgactgttgacggatgggatcatgagagtt
ggatctactgcatcaaagaaactatcagaaaatttggtagcagaatggttttctcaggca
gctgatggtaacaatgaagcattttctaaactcaaactttatgcacaagtctgcagatat
gacctaggtccttatcttgcttcccagccattggacagctctctactttctcagccaaat
ttagttgtccctgcaagtcagtctttgattactccacctcagatgacaaatactggaaat
gctaacactccatccaccaccctagcatctgcagtgagtaacactatgacgttgacttca
ggtggtgccatgtcttcttcagttgccacagctaactcaactttgaccacaacttcagct
tcatcttcatcatcctccagtttgaatagtggagtatcatcaaataaactaccttcattt
ccaccctttggcagtatgaacagtagtgctgcaggatccatgtctacacaaacaactaca
gttcagaatggccagctaggagggcaacaggcatcagctctacagacagctgggatttct
ggagagtcatctttgcttaccactcagccccatcctgatgtgtctgaaagcacaatggat
cgggataaagttggaatccccacagatggtgattcacatgcaatcacctatccacctgca
attgtcgtttatataattgatccttttacatatgaaaataaagatgagagcactaactct
tctaatgtatggactttggggctacttcgatgctttctggaaatggtccagactctccct
cctcatatcaagagtactgtttctgtacagattgttccttgtcagtacctgttgcaacct
gtgaagcatgaagataggcaaatctatacccagcatttaaaatctctggctttttcggcc
tttacccagtgtcggagaccacttccaacatcaaccaatgtgaaaacattaactggtttt
ggtccaggtttagccatggaaactgctcttaaaagtcctgatagaccagagtgtattcga
ctttatacgcctccttttattctggctccagtgaaggacaaacagacagagctcggagaa
acttttggagaagctggtcagaaatacaatgttctttttgtaggctactgtttatcacat
gatcaaagatggattcttgcatcttgcacagatctatatggagaacttttagaaacttgt
atcattaacatcgatgttccaaatagggctcgtcggaaaaaaggttcagctcgaagattt
ggtctacagaaactgtgggagtggtgcttaggacttatacaaatgagttcattaccgtgg
agagttgtaattggtcggctaggaaggattggtcatggagaattaaaagattggagctgt
ttgctgagtcgtcgaaacttgcagtctctaagcaaaaggctcaaagatatgtgtagaatg
tgtggtatatctgctgcagactctcctagcattctcagtgcttgcttggtagcaatggaa
ccccaaggctcttttgttattatgccagattctgtgtcaactggttctgtttttggaagg
agcaccactctaaacatgcagacatctcagctaaataccccacaggatacatcgtgtact
catatacttgtgttccctacttctgcttctgtgcaagtagcttcagctacttacaccact
gaaaatttggacttggctttcaatcccaacaatgatggaataggtatctttgatttgtta
gacacaccagatgatcttgaccctgatatcattagtatccttcctgcctctccaacggtg
tcccctgtacattctccaggatctcattacccgcatggaggtgatactggcaagggtcaa
ggtactgatcggctactttcaacagaatctcatgatgaagtaactaatattcttcagcaa
ccactggcccttggttactttgtatcaactgccaaagcgggtccattacctgactggttc
tggtcagcatgtcctcaagcacaatatcagtgtcccctatttcttaaggcctctttgcac
ctccacgtgccttcagtgcaatctgacgagctgcttcacagtaaacactcccatccactt
gactcaaatcagacttcagatgtcctcaggtttgttttggaacagtacaatgcactctcc
tggctaacctgtgaccctgcaatccaggacagacgctcgtgtctcccaattcattttgtg
gtgctgaatcagttatataactttatcatgaatatgctgtga
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integrated database retrieval system
