Trichechus manatus latirostris (Florida manatee): 101354075
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Entry
101354075 CDS
T05135
Name
(RefSeq) nuclear valosin-containing protein-like isoform X2
KO
K14571
ribosome biogenesis ATPase
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101354075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmu03009
]
101354075
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101354075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
TIP49
AAA_2
AAA_28
nSTAND3
NPHP3_N
AAA_33
Mg_chelatase
RNA_helicase
AAA_17
AAA_18
ABC_tran
Vps4_C
NACHT
ATPase
Viral_helicase1
Zeta_toxin
AAA_3
nSTAND_NTPase5
NB-ARC
Rad17
TsaE
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
101354075
NCBI-ProteinID:
XP_004376008
UniProt:
A0A2Y9DK60
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MKPVSAGFVDSKLKRRVIQYLNSNRCGKYVDTGFLASDLQRMYSVDYGRRKKNAFRIQVE
KVFNIISTEKKLKDLTELEGENLAKRSRQGEEDNEYTESSSDDDSDMEDYPDPQSANHMN
SSLLSLYRKGNADSVPNTSKMEQRETTTSAPRLTSKTGSVPLKTSATVSEGGWFIDKTPG
GTKDCFFLDLSDETSNHEKPVSEIQDSKDSSLLESDKKPKGRLKSKGSKRKKDHLQEVDG
EIEAVLQKKAKARGLELQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYQHLGVVPPRG
VLLHGPPGCGKTLLAQAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCI
LFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVATTARVLVIGATNRPDSLDPAL
RRAGRFDREICLGIPDEASRERILQTLCRKLKLPEAFHFHHLAHLTPGFVGADLMALCRE
AAMCAVNRVLMKLQEQQKKSPEIEGWPAAGCQEERIGTEHVSKTQDELQRLLGLLRDQEP
LSEEQLQGLCIELNDFIVALASVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAP
VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE
RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDREAGASVRVVNQLLTEMDGLETRQQVFI
MAATNRPDIIDPAILRPGRLDKTLFVGLPPAADRLAILKTITKNGTKPPLDADVNLEAIA
GDLRCDCYTGADLSALVREASLCALRQEMARQKNGNEKGELKISLKHFEEAFKKVKPSIS
KKDQVMYEALQQSLR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggtatccgcagggttcgtggacagtaagctaaagcgacgagtcattcagtat
cttaacagtaacagatgtggcaaatatgtggacactggattcttagcatctgatttgcaa
agaatgtacagtgtagactatggtcgaagaaaaaaaaatgctttcaggattcaggtagaa
aaagtgtttaacataattagtactgagaagaaacttaaggatctaacagaattagaaggt
gaaaatctagcaaaaagatcaagacaaggtgaagaggataatgagtatactgaaagcagt
tctgatgatgattcagatatggaagattacccagatccacagtcagccaatcacatgaac
agttccctgctctccttgtatcggaaaggaaatgctgattctgttccaaatacttccaag
atggagcaaagagaaaccaccacttcagcaccgcggctaacttccaaaacaggctccgtt
cctttgaagacctctgctacagtttctgaaggaggatggtttattgacaaaaccccaggt
ggaacgaaagattgttttttcttggacctatcagatgagacaagtaatcatgagaagcca
gtatctgagatacaggattccaaagattcttctcttctggagagtgataaaaaaccaaaa
ggcaggctaaagagcaaaggaagcaaaaggaagaaagaccatcttcaggaagtggatgga
gaaatagaagctgtcttgcaaaagaaagctaaagccagggggctagaattgcaaatctcc
aatgtgaagtttgaagatgttgggggcaatgatatgacactaaaggaagtctgcaagatg
ctcatacacatgcgtcacccggaggtgtaccagcacctgggcgtcgtcccccctcgagga
gttctccttcacgggcccccaggctgtgggaagacattacttgctcaagcaattgctggg
gaacttgacctgccaattttgaaagtcgctgctacagagattgtgtctggagtgtctgga
gaatctgaacagaagctgagagaactattcgaacaagcagtgtcaagtgcaccatgcatc
ctttttattgatgaaattgatgctattacccccaaaagagaagttgcttcaaaagatatg
gaacgaagaattgtagcccagctccttacctgcatggatgatctgaacaacgtggccact
acagctcgagtcctagtcattggcgctactaaccgaccagactcgttagaccctgctttg
agacgcgcaggaaggtttgaccgagaaatatgcctgggtatcccagatgaagcatccagg
gaaagaatacttcagaccttatgcaggaagctaaaacttcctgaagcttttcattttcat
cacttagcacacctcacaccaggctttgttggtgctgacctgatggcgctctgccgagag
gcagccatgtgtgcagtcaacagggtcttgatgaagctacaggagcagcagaagaaaagt
cctgagattgaaggttggcctgctgcaggatgccaggaagaaaggataggaactgagcat
gtttccaaaacacaggatgaattgcaaagattgctggggttgctgagagaccaagagccc
ctctcggaagaacagctgcaagggctgtgcattgaattgaatgatttcattgttgctcta
gcctcagtacaaccctctgccaaaagggaaggctttgtcactgtccccaatgtcacatgg
gcagatattggtgccctggaagatattagagaggagctcaccatggcaatattggcacca
gtacgtaacccagatcagttcaaagctctcggattagtgactccagctggtgtccttctt
gctggtcctcctggctgtggtaaaactctcctggcaaaggccgtggcaaatgagtctgga
ctaaacttcatatctgtaaagggtcctgaattactaaacatgtacgttggcgagagtgaa
cgcgctgtgcgccaggtttttcagcgagccaagaactcagcaccctgtgtgatattcttc
gatgaagtggatgccttatgccctcgaagatcagaccgagaggcaggggcaagcgtccga
gtggtgaatcagctgcttacggagatggatggtctggaaacacgacagcaggtctttatt
atggcggccactaacaggccagatatcattgaccctgcaatcctgcgcccaggccggcta
gacaaaacactctttgttggtttaccacctgcagctgatcgtcttgccatcttaaaaact
atcacaaaaaatggtaccaaacccccactggatgcagatgtaaatttggaagcaattgct
ggtgacctccgctgtgattgctatacgggcgcagatctctcggcgttggtgcgggaagct
tctctctgtgccctgagacaggaaatggcaagacagaagaatggaaatgaaaaaggtgaa
ctcaagattagtcttaaacactttgaagaagcttttaagaaagtaaaaccatctatatca
aaaaaggatcaagtgatgtatgaagctctgcagcagtctctccgctga
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