Trichechus manatus latirostris (Florida manatee): 101354166
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Entry
101354166 CDS
T05135
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03082
ATP-dependent chromatin remodeling
tmu04714
Thermogenesis
tmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101354166
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101354166
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101354166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101354166
03036 Chromosome and associated proteins [BR:
tmu03036
]
101354166
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101354166
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101354166
Chromatin remodeling factors
BAF complex
101354166
PBAF complex
101354166
GBAF(ncBAF) complex
101354166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101354166
NCBI-ProteinID:
XP_023584346
UniProt:
A0A2Y9QSH6
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MFCHEFKPKVVVYHLRLNCTVYFHALPADFINSFRLQARIAHRIQELENLPGSLPPDLRT
KATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEK
QQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKE
TERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAK
EKKKRRRRKKKAEENAEGGESALGPDGEPIDDSSQMSDLPVKVTHTETGKVLFGPEAPKA
SQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQEMEEKILLDPNSEEVSEKDA
KQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEW
MVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDK
WAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGH
RMKNHHCKLTQVLNTHYVAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFN
APFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQ
KILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLG
YSNGVINGAELYRASGKFELLDRILPKLRATGHRVLLFCQMTSLMTIMEDYFAFRNFLYL
RLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDL
QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERR
AFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRL
MEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNL
EEMEEEVRLKKRKRRRNVDKEPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTV
INYKDRCNVEKVPGNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE
RIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED
ESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDE
EQDENEQSEASATDDE
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgttttgccatgaatttaaacctaaggtggtggtttatcatttaagactgaattgcact
gtgtatttccacgccctgcccgctgattttattaactcgtttagactccaggcccgcata
gctcacagaatacaagagctggaaaacctgcctggctccctgccaccggatttacgaacc
aaagccaccgtggaactgaaggcacttcggttactcaatttccaacgtcagctgaggcag
gaggtggtggcctgcatgcgccgggacacaaccctcgagacggccctcaactccaaggcg
tacaaacggagcaagcgccagacgctgagggaagcccgcatgacagagaagctggagaag
cagcagaagattgagcaggagaggaaacgccggcagaagcaccaggaatacctgaacagc
attttgcaacatgcaaaagacttcaaggagtaccatcggtctgtggccggcaagatccag
aagctttcgaaagccgtggcgacatggcacgccaacaccgagagggagcagaagaaagag
actgagcggatcgaaaaggagaggatgcggagactgatggctgaagatgaagaaggctat
agaaagctgattgatcaaaagaaagacaggcgtctagcttaccttttgcagcagacagac
gagtatgtagccaacctgaccaacctggtttgggagcacaagcaagcccaagcagccaaa
gagaagaagaagaggaggaggaggaagaagaaggctgaagagaatgcagaaggaggggag
tctgccctggggccagatggagagcccatagatgacagcagccagatgagcgacctgccg
gtcaaggtgacccacacggaaaccggaaaggtcctctttggaccagaagctcccaaagca
agtcagctggacgcctggttggaaatgaaccctggctacgaagttgcccctcggtctgac
agtgaggagagtgattccgactacgaggaagaggatgaggaagaagagtccagtaggcaa
gaaatggaagagaaaatacttctggatccaaacagtgaagaagtgtccgagaaggacgct
aagcagatcattgagacggccaagcaggacgtggacgacgagtacagcatgcagtacagt
gcgcggggctcccagtcctactacactgtggctcacgccatctccgagcgggtggagaag
cagtcggccctcctcatcaacgggaccctgaagcattaccagctccagggcctggaatgg
atggtttcgctgtataataacaatctgaatggaatcttagcggatgaaatggggctgggg
aagaccatccagaccattgcactcattacatatttgatggagcacaaaagactcaatggc
ccctacctcatcattgtgcccctctcgactctatctaactggacatatgaatttgacaag
tgggcgccttctgtggtgaaaatttcctacaagggcacccctgccatgcgccgctcccta
gtcccccagctacgaagtggcaaattcaacgtccttttgacaacttatgagtacattata
aaagacaagcacattcttgccaagatccggtggaaatacatgatcgtggacgaaggccac
cgcatgaagaaccaccactgcaagttgacccaggtcttgaatactcactacgtggccccg
agaagggttctcttgacggggaccccactgcagaacaagctccctgaactctgggccctc
ctcaatttcctcctccccacaatcttcaagagctgcagcaccttcgagcagtggttcaat
gccccgtttgccatgactggagaaagggtggacttaaatgaggaagaaactatattgatc
atcagacgtctgcataaggtattgagaccgtttctgctgaggagactgaagaaagaagta
gaatcccagcttccagaaaaagtcgaatatgtgatcaagtgtgacatgtcagctctgcag
aagattctgtatcgccacatgcaagccaaggggatcctcctcacagacggttctgagaaa
gataagaaggggaaaggaggtgcgaagacactcatgaataccatcatgcagttgagaaaa
atctgcaatcacccgtatatgttccagcacatcgaggaatcctttgctgaacacctgggc
tattccaatggagtcatcaatggggctgagctgtaccgggcctcaggaaagtttgagctg
ctggaccgcattctgccaaagctgagagcaacaggccaccgcgtgctgctcttctgccag
atgacctccctcatgaccatcatggaggactactttgccttccggaacttcctttacctg
cgcctcgacggcaccaccaagtcggaagaccgtgctgctctgctgaagaaattcaacgaa
cctgggtcccagtacttcattttcttgctgagcacaagagctggaggcctgggcttaaat
cttcaggcggccgacactgtggtgatcttcgacagtgactggaacccccaccaggatctg
caggcgcaggaccgggctcaccgcatcggccagcagaacgaggtgcgcgttctgaggctg
tgcacggtgaacagcgtggaggagaaaattctcgccgctgccaagtacaagctgaatgtg
gaccagaaggtcatccaggcgggcatgtttgaccagaagtcttcgagccacgagcggcgg
gcgttcctgcaggccatcttggagcatgaagaggaaaacgaggaagaagacgaggtcccg
gatgatgagaccctgaaccagatgattgctcggcgggaagaagaattcgatcttttcatg
cgtatggacatggaccggcgccgggaggatgctcggaacccgaagcgcaaacctcgctta
atggaggaagacgagctgccctcctggatcattaaagatgacgccgaggtggagaggctg
acgtgtgaagaagaggaagagaagatatttggcagggggtctcgccagcgccgcgatgtg
gactacagtgacgccctcacggagaagcagtggctaagggccattgaagacggcaatttg
gaagaaatggaagaggaagtgcggcttaagaagcgaaaaagacgaagaaatgtggataaa
gagcctgcaaaagaagatgtagaaaaagccaagaagaggagaggccgtcccccagctgag
aaactatcacccaaccccccaaaactgacaaagcagatgaatgcaatcatagatactgtg
atcaactacaaagacaggtgtaacgtggagaaggtgcccggtaattctcagttggaaata
gaaggaaacagttcagggcggcagctcagcgaggtcttcattcagttaccatcaaggaaa
gaattaccagaatactatgaattaattaggaagcccgtggatttcaaaaaaataaaggag
agaattcgtaatcataagtaccggagcctgggtgacctggagaaggacgtcatgcttctc
tgccacaacgctcagaccttcaatttggagggctcccagatctacgaagactccattgtc
ttgcagtcagtgtttaaaagtgcccggcagaaaatcgccaaagaggaagagagcgaagat
gaaagcaatgaggaggaggaagaggaggatgaagaggagtctgagtctgaggcgaaatct
gttaaggtgaaaatcaagctcaacaaaaaagatgagaaaggacgggataaaggaaaaggc
aagaaaaggccgaatcgaggaaaagccaaacccgttgtgagcgatttcgacagtgatgaa
gagcaggatgagaatgaacagtcagaagcaagtgcgactgatgatgagtga
DBGET
integrated database retrieval system
