Trichechus manatus latirostris (Florida manatee): 101354732
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Entry
101354732 CDS
T05135
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101354732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101354732
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101354732
mRNA degradation factors
5'-3' decay
Decapping complex
101354732
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
101354732
NCBI-ProteinID:
XP_004389349
UniProt:
A0A2Y9EA80
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MDLLGDHEENLAERLSKMVIENELEDPAVMRAVQTRPVLQPQSGSLNSSIWDGSEVLRRI
RGPLLTQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSPIIGSPPVRAVPIGTP
PKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSVPNSSLLGHPFPPSVP
PVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNSKLLQGRVGQMLPPAPGF
RAFFSAPPPATPPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQHRRLLHQRQQQNRN
QHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQ
NYFEKLEKLSAAEEVQGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLTVSSVNNPR
KMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYERRYLLSLEEERPAL
VDGRKHNICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILM
ATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLMNLPQSAAAPAPSNP
HLTAVLQNKFGLSLLLVVLSRGEDLQSSDPATESTQNNQWTEVMYMATRELLRIPQAALA
KPISIPTNLVSLFSRYVDQQKLNLLETKLQLIQGIR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgggtgaccatgaggagaacctggcagaaaggcttagtaagatggtgatt
gaaaatgaactagaagatccagctgtcatgagggcagtgcagaccaggccagttttgcaa
ccccaatcaggaagtctcaattccagcatctgggatggatctgaagttctgaggcgaatc
cgaggaccactgcttactcaggaaatgcctacagtatctgtactagaatatgccttgccc
cagaggcctccacagggcccagaagatgatcgggatctttctgagcgtgcattaccgagg
cgatcaacttcacctatcattgggagtcctcctgttcgagctgtgcccataggcacccca
cctaagcagatggctgtacccagcttcaaccagcagattctgtgtccaaagcctgtccat
gttcggcccccaatgccaccacgttatcctgctccctatggtgagaggatgtctccaaac
cagctctgcagtgtcccgaactcttccctcctaggtcaccctttccctcctagtgttcct
cctgttctcagccctcttcagagagcacagcttctcggaggggcacagctacagcctgga
cggatgtctcccagccagtttgcacgggtgcctgggtttgtcggtagtccgcttgctgcc
atgaattccaagttgctgcaagggcgagttgggcagatgcttcccccagcaccaggcttt
cgtgccttctttagcgctccaccccccgctacaccacctcctccacagcagcaccctcct
ggcccaggacctcacctgcaaaacctaagatctcaggccccaatgtttagaccagacaca
actcaccttcacccacagcaccgccgactcttgcatcagagacagcaacagaatagaaat
cagcatcggaatctgaatggtgcaggagatagaggaagtcatcggagcagtcatcaggat
catcttcgcaaggatccttatgccaatctcatgttgcagcgagaaaaggattgggtctct
aaaatccaaatgatgcaactgcaaagcactgatccctacctggatgatttttattaccag
aattactttgagaaactggagaaactgtctgctgctgaagaagtgcaaggtgacggccct
aaaaaggagcgcaccaagctcattacccctcaggtggccaaactggagcatgcctataag
ccagtgcagtttgagggctctctgggaaagcttactgtctctagcgtgaataatcctcga
aaaatgatcgatgctgttgtgacatctcggagtgaggatgatgagacaaaagaaaagcag
gttcgggacaagagacgaaaaacacttgtcataattgagaagacatacagtttactcctc
gatgtggaggattatgaaaggcgttatctcctaagcctggaagaagagcggcctgcccta
gtggatggaagaaagcacaacatttgtagcatgtatgacaacttaagggggaaattgcct
ggacaagagaggccaagtgatgaccactttgtacagatcatgtgtatccggaaagggaag
agaatggttgcccgtattcttcctttcctctccacagagcaagcagctgatattctcatg
gcaacagccaggaacctccctttccttatcaagaaggatgcacaagatgaggtgctgcca
tgcttattgagtcccttctctctcctcctctatcatcttccgtcagtgactgtcaccagc
cttctgcaacagctaatgaacctacctcagagtgcagctgcaccagcaccctccaaccct
cacctcactgctgtgctccagaacaagtttggcctgtcactgctcctcgttgtactgagc
cgtggggaagacctacagagttcagatcctgctacagaatcaacgcaaaacaaccagtgg
acagaggtgatgtacatggcaacccgagaacttctgcggattccccaagcagccctggcc
aagccgatctctatacccacaaacctggtatccctcttttcacgctatgttgaccaacag
aagctgaacttgctggagacaaaactgcagctaattcaggggatacgataa
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