Trichechus manatus latirostris (Florida manatee): 101354767
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Entry
101354767 CDS
T05135
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03430
Mismatch repair
tmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101354767
03460 Fanconi anemia pathway
101354767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101354767
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
101354767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
101354767
NCBI-ProteinID:
XP_004380874
UniProt:
A0A2Y9DTN2
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MERAEGSSTELAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKD
YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTHVETFGFRGEALSSLCALSDV
TISTCHTSAKVGTRLVFDHSGKIVQKTPFPRPRGTTVSVQQLFYTLPVRHKEFQKNIKKE
YVKMVQVLHAYCIISTGIRLSCTNQVGQGKRQPVVCTSGNASIKENIGSVFGQKQLQSLI
PFVQLPPSESVCEEYGLCYSEAVQNLFCISGFVSHGAHGVGRSSTERQFFFINRRPCDPA
KVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFDSDVNKLNVSQQPLLNIEGKIVKMHSAEMEKPLPEKQESPALFQTQGEGKRAVTISR
LREAFSLHHTAEYQPQGLRTPEPRRVAPGPRTRVPFSSKSDTLRPQKPVSGRGVCSPQDK
KVHPDEDPCDYRDTVEMEKDSGHDSTSVGSEVGDSTPETGSHFSSDQATSSPEDGVSQEK
VESCEKVPEMDCPFSDVECHVDQEDTGYKCRLLPQPTNISSSNIKLFKKEEIPSSSDIPQ
KLINSQNSSVSLIDVAVKINKKIVPLDFSMSSLAKRIKQLNQQEQRREEKQNYRRFRAKI
CPGENQAAEDELRREISKTMFAEMEIIGQFNLGFIITRLNTDIFIVDQHATDEKYNFEML
QQHTVLQGQRLIAPQTLNLTAVNAAVLIENLEIFRKNGFDFIIDEDAPVTERVKLISLPT
SKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLIT
HMGEMDHPWNCPHGRPTMRHIASLDVVSQN
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagctgagggttccagtacagaacttgcgaaggccatcaaacctatcgatcgg
aagtcagtccatcagatttgttctgggcaagtggtactgagtctaagcactgctgtgaag
gagttggtagaaaacagtgtggatgccggtgccactaatattgatctaagacttaaagac
tatggggtggatctcattgaagtttcagacaatggatgtggggtagaagaagaaaacttt
gaaggcttaactttgaaacatcacacttctaagattcaggagtttgctgatctaacccat
gttgaaacgtttggttttcggggggaagctctgagctcactttgtgcactgagtgatgta
actatttctacctgtcacacgtctgcaaaggttgggactcgattggtgtttgatcacagt
gggaaaattgttcagaaaacccctttcccccggccaagagggaccacagtcagcgtgcag
cagttattttatacgctacctgtgcgtcataaggaatttcagaagaatattaaaaaggag
tatgtcaaaatggtccaggtcttacacgcctactgtatcatttcaacaggcattcgttta
agttgcactaatcaggttggacagggaaaacgtcagcctgtggtttgcaccagcggaaac
gccagcataaaggaaaatattggatctgtgtttggacagaagcagttgcaaagcctcatt
ccttttgttcagctgccccctagtgaatccgtttgtgaagagtacggtctgtgctattct
gaagctgtgcagaatctgttttgtatctcaggtttcgtttcacacggcgcacatggtgtt
ggaaggagttcaactgagagacagtttttctttatcaatcggcggccttgtgacccagca
aaggtttccagacttgtgaatgaggtctatcacatgtacaatcgacaccaatatccattt
gttgttcttaacatttctgttgattcagaatgtgttgatatcaatgttaccccggataaa
aggcaaattttactacaagaggagaagcttttgttggcagttttaaagacctctttgata
ggaatgtttgatagtgatgtaaacaaacttaatgtcagtcagcagccactgttgaatatt
gaagggaaaatcgtgaagatgcactcggcggagatggaaaagcctctgccagaaaagcag
gaaagccctgctttgttccagactcaaggagaaggaaaacgggcagtgactatttccaga
ctgagagaggccttttctcttcatcacacagcagagtaccagcctcagggcctgagaact
cctgagccgagacgggttgctcctgggccaagaacaagggtaccgttttctagcaagtca
gacaccctgcgcccccagaagcctgtctctggcaggggcgtgtgtagccctcaggacaag
aaggtgcatccagatgaggacccctgtgactatagggacacagtggagatggagaaggac
tcagggcacgacagcacctcagtgggctcagaggtgggggacagcaccccagagacgggc
agccacttcagcagcgaccaggcaaccagctcccctgaagacggagtttcacaagaaaag
gtggaatcttgtgagaaagtacctgaaatggactgtcctttttcagatgtggaatgccac
gtagaccaagaagatactggatataagtgtagacttttgccacagcccactaatatctca
tcctcaaacataaaactttttaaaaaagaagaaattccttcaagttctgacattcctcaa
aagttgattaattctcagaacagttcagtatctctgattgatgtagctgttaagattaat
aagaaaattgtgcctcttgatttctccatgagctctttagctaaacgaataaagcagtta
aatcagcaagaacagcgaagagaagagaaacagaattataggagatttagggcaaagatc
tgccctggagaaaatcaggcagcagaagatgagctaaggagagagataagtaaaacgatg
tttgcagaaatggaaatcattggtcaattcaacttgggatttataataaccagactgaac
acggatatcttcatagtggaccagcatgcgacagatgagaaatacaactttgagatgctg
cagcagcacaccgttctccagggccagagacttatcgcacctcagactctcaatttaact
gcagtcaatgcagctgttctgatagaaaatctggaaattttcagaaagaatggctttgac
tttataattgatgaagatgctccggtcactgaaagagttaagttgatttccttgccaact
agtaaaaactggaccttcggaccccaggacatagatgagctgatctttatgctgagtgac
tgccctggggttatgtgccgaccttcccgagtccggcagatgttcgcctccagagcctgc
cggaagtctgtgatgattggaacggctcttaacacaagtgagatgaagaagctcatcacc
cacatgggcgagatggaccatccctggaactgcccccacggaagaccaaccatgagacac
atcgccagtttggatgttgtttctcaaaactaa
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