Trichechus manatus latirostris (Florida manatee): 101355070
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Entry
101355070 CDS
T05135
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X2
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101355070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101355070
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101355070
mRNA degradation factors
5'-3' decay
Decapping complex
101355070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_HPS5
WD40_CDC20-Fz
DUF445
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
101355070
NCBI-ProteinID:
XP_004371529
UniProt:
A0A2Y9DBF0
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MDSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNTYNGDLNGLLVPDPLSSGDGTS
TSKPGLRAMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAVVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLTLVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCSEEGSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGSHGVGAVESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFAFGESRPELSPEGLGSASHSSQPDLHRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSTSLQQITTSPSSSSSSNSGSGSLTAVSAISSTSAVDPSLPRPPEELTLSPKLQLDGSL
TMSSSNLQASPRSLLPGLLSGPADKLTTKGSVQVPTAASALSLELQDVEPLGLPQASPSR
TRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLSPRPRPG
PELGPQLGLDEGTGDGDRHSTPSLLEAALTQEAVAPDSQVWPTAPDITRETCSSLAEIPR
NGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASASGGFGTKVPTPRLPA
KDWKTKGSPRASPKLKRKGKKDDRDTAVGSRLTEHQVVEPPDDWPTIIWQQQRELAELRH
CQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQEQLTQQ
LSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSSSVATKLTAVEGTMKENIS
KLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQ
EYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQHQLHV
AVSSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAHLDCQAQQA
HILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLA
SDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLGKAAR
RLSLMLHGLAAPSLP
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggactcctgcgcgagtatcgacatcgaggacgccacgcagcacctgcgggacattctg
aagctggaccggcccgcagggggccccagtgcagagagccagcggccatctaacacctac
aatggggatctcaacgggctcctggttccagacccactcagctcaggtgatggtacctcg
acaagcaagcctggtctccgagctatgccacccattaacctgcaggagaagcaggtcatc
tgcctctcgggagatgacagttccacttgcattggaattttggccaaggaggtggagatt
gtggccagcagtgactccagcatttcaagcaaggcacgggggagcaacaaggtaaaaatc
cagcctgtagccaagtatgactgggagcagaaatactactatggcaaccttattgctgtg
tctaactctttcttggcctatgccattcgggctgccaacaatggctcagcagtggtgcga
gtgatcagtgttagcacatcagagcgaaccctgctcaagggcttcacaggcagcgtggct
gatctggcctttgcacacctcaactccccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttgactctggttaatggcaaaattcaagaagagatcttggtccac
atccggcagccagagggcacaccactgaaccacttccgcaggatcatctggtgccccttc
atccctgaggagagtgaggactgcagcgaggagggcagcccaacagtggccctgctgcat
gaggaccgggctgaggtgtgggacctggacatgctccgctccagccacagcacctggcct
gtggatgtcagtcaaatcaaacagggcttcattgtggtgaaaggccacagcacgtgcctg
agtgaaggggccctctccccagatgggactgtcctggctactgccagccacgatggctac
gtcaagttctggcagatctacattgaggggcaggacgagccaaggtgtctgcatgagtgg
aagccccacgacgggcggcctctctcctgcctcctgttttgtgacaaccacaagaaacag
gaccctgacgttcctttctggaggttcctcattactggtgctgaccagaatcaggagcta
aagatgtggtgcacagtgtcctggacctgcctgcagaccattcgcttctccccagatatc
ttcagttcagtgagtgtgccccccagcctcaaggtttgcctggacctttcagcagagtac
ctgattctcagtgatgtgcaacggaaggtcctctacgtgatggagctgctgcagaaccag
gaggagggccatgcctgcttcagctccatctctgagttcctgctcacccaccctgtgctg
agctttggtatccaggttgtgagtcgctgccgcctgcggcacactgaggtgctgcctgct
gaggaggagaatgatagcctgggggctgatggttctcacggagtcggtgctgtggagtct
gcagccggtgtgctcatcaagctgttttgtgtgcataccaaggcattgcaagatgtgcag
atccgtttccagccacagctgaaccctgatgtggtagccccactccccacccacactgcc
catgaggacttcgcatttggagagtctcggcctgagctgagccccgaaggcctggggtca
gcctctcacagctcccagcctgaccttcaccgcatcgtggagctgcctgcgcctgcggac
ttccttagtctgagcagtgagaccaaacccaagctcatgacacctgacgccttcatgaca
cccagcacctccctgcagcagatcaccacatcccccagtagcagcagcagcagcaacagc
ggcagcggctcccttacagctgtgtctgccattagcagcacctcagccgtggacccctcc
ttgcccaggccacccgaggagctgaccttgagccccaagctacagctggacggcagcctg
acaatgagcagcagcaacttgcaggcaagcccgcgcagcctcctgcctggcctgctctca
ggcccagctgacaagttgacgaccaagggttctgtgcaggtgcccactgctgcctctgca
ttgtcactggagctgcaggatgtggagcccctggggctaccccaggcctcccctagccgg
acccgctctcccgacgttatctcctcagcgtccactgccctgtcccaagatatccctgag
attgcatctgaggccctgtcccgtggctttggctcctctgctcctgaaggccttgagcca
gacagtatggcctcagctgcctcggcgctacacctgctgtctccacggccccggccaggg
cccgaactgggcccgcagcttggcctggatgaaggcacgggggatggcgatcgacatagt
accccctccctcttggaggcagccttgacccaagaggctgtggcccctgacagtcaggtc
tggcctacggcacccgacattactcgtgaaacctgcagcagcctagcagagatccccaga
aatggcctccaggaaaagcacaagagcctggccttccaccggccaccttatcacctgctg
cagcaacatgacagccaggatgccagtgccgagcaaagtgaccatgatgacgaagtggca
agccttgcctctgcctcagggggatttggcaccaaagttcccactccacggctacctgcc
aaagactggaagaccaagggttcccctcgggcttcacccaagctcaagaggaagggcaag
aaggacgacagggatacagctgtgggatcccggcttacggagcaccaggtggtagaaccc
cctgacgactggccaacaataatttggcaacagcagagagagctggcagagctgcggcac
tgccaagaagagctcctgcagcgtctgtgcacccaactcgaaggcctacaaagcaccgtc
acaggccatgtagaacgtgcccttgagacacggcatgagcaggagcagcggcggttagag
cgggcactggccgagggacagcagcggggtgggcagctgcaggagcagctgacacagcag
ctgtcccaggcactgtcttcagctgtggctgggcggctggagcgcagcatacgggatgag
atcaagaagacggtgcctccgtgtgtctccaggagtctggagcctgtggcaggccaactg
agcagctcagtggccaccaagcttacagctgtagagggcaccatgaaagagaacatctcc
aagctgctcaagtccaagaacttgacagatgccatcgcccgagcagctgcagacacatta
caggggccaatgcaggctgcctatcgtgaagccttccagagcgtggtgctgcccgccttc
gagaagagctgtcaggccatgttccagcagatcaatgatagcttccggctgggcacacag
gaatacttgcagcagctagagagccacatgaagagtcggaaggcgcgggaacaggaggca
cgggagcctgtgctggcccagctgcggggcctggtcagcactctgcagggtgccactgag
cagatggcggccactgtatccagcagtgtccgggctgaggtgcagcaccagctgcacgtg
gctgtgagcagcttgcaggaatccattttagcccaggtacagcgcattgtaaagggtgag
gtgagtgtggcgctcaaggagcaacaggctgctgtcacctccagcatcatgcaggccatg
cgctcagctgctggcacaccggtccccgctgcccacctcgactgccaggcccagcaagcc
cacatcctgcagctgctgcagcagggtcacctcaatcaggccttccagcaggccctgaca
gccgctgacctgaacctggtgctgtatgtgtgtgaaactgtggacccagcccaggttttt
ggacagccaccctgcccgctctcccagcctgtgctcctctccctcatccagcagctggct
tctgaccttggcactcgaactgacctcaagctcagctacctggaggaggctgtgatgcac
ttggaccacagtgaccccatcactcgggaccacatgggctctgtcatggcccaggtgcgc
cagaagctcttccagttcctgcaggccgagccacacaactcacttggcaaagcggctcgg
cgtctcagcctcatgctgcacggccttgcggcccccagcctcccgtag
DBGET
integrated database retrieval system
