KEGG   Trichechus manatus latirostris (Florida manatee): 101355270
Entry
101355270         CDS       T05135                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03020  RNA polymerase
tmu03420  Nucleotide excision repair
tmu04623  Cytosolic DNA-sensing pathway
tmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101355270
  09124 Replication and repair
   03420 Nucleotide excision repair
    101355270
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    101355270
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    101355270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tmu03021]
    101355270
   03400 DNA repair and recombination proteins [BR:tmu03400]
    101355270
Transcription machinery [BR:tmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101355270
  RNA polymerase III system
   RNA polymerase III
     101355270
  RNA polymerase I system
   RNA polymerase I
     101355270
DNA repair and recombination proteins [BR:tmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101355270
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 101355270
NCBI-ProteinID: XP_004378575
UniProt: A0A2Y9DQX1
LinkDB
Position
Unknown
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccgcctctggaagatacgcaagactatcatgcagctg
tgccacgaccgtggctacctggtgacacaggatgagctggaccagacgctggaggagttc
aaagcccagtttggggacaagccgagtgaagggcggccacggcgcacagacctcaccgtg
ctggtggcccacaacgatgaccccaccgaccagatgttcgtcttcttcccagaggagccc
aaggtgggcatcaagaccatcaaggtgtactgccagcgcatgcaagaggagaacatcacc
cgcgccctcatcgtggtgcagcagggcatgacgccctctgccaagcagtctctggtcgac
atggcccccaagtacatcctggagcagttcctgcagcaggagctgctcatcaacatcacg
gagcacgagctggtgcccgagcacgttgtcatgaccaaggaggaggtgacggagctgctg
gcccgatataaactccgggagaaccagctgcccaggatccaggccggagacccggttgcg
cgatacttcgggataaagcgcggccaggtggtgaagatcatccggcccagcgagacggcg
ggcaggtacatcacctaccggctcgtacagtag

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