Trichechus manatus latirostris (Florida manatee): 101355452
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Entry
101355452 CDS
T05135
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04140
Autophagy - animal
tmu04148
Efferocytosis
tmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101355452
04148 Efferocytosis
101355452
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101355452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101355452
Membrane trafficking [BR:
tmu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
101355452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
KCTD11_21_C
SAM_CEP-1_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
101355452
NCBI-ProteinID:
XP_004380715
UniProt:
A0A2Y9DUN7
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDAVPADVTAPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHTDTGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKEDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYL
TQKRSQLVKKLHDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDRVLGFLTENFKGLA
IPYLEHVIHVWKETGSQFHNCLIQLYCEKVQGLMKEYLLSFPAGQTPVPAGEEEGELGEY
RQKLLRFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTRMAE
EYCHKHYDQNKNGNKDVYLSLLRMYLSPPSVHCLGPIKLELLELLEPQANLQAALQVLEL
HHSKLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERI
LHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgccgatcctcgaaaagctgcctctgcagatcgactgt
cttgctgcctgggaggaatggcttctcgttggaaccaagcaaggacatcttcttctctat
aggattcggaaggatgctgtgccagcagatgtaacagcccctgaaagtggcagttgcaac
aggtttgaagtaacactagagaaatccaataagaatttctccaagaagatccagcagatc
catgtggtttcccagtttaagattctggtcagcttgttagaaaataacatttatgtccat
gacctattgacatttcaacaaatcactacggtgtcaaaggcaaagggagcgtcactgttc
acctgtgacctccagcacacagatactggtgaggaggtgttgcggatgtgtgtggctgtg
aaaaagaagctgcagctctatttctggaaggacagagaatttcatgaactgcagggggac
ttcagtgtaccagacgtgcccaagtccatggcgtggtgtgaaaactctatctgtgtgggt
ttcaagcgggactactacctaataagggtggatggaaagggatctatcaaagagctcttt
ccaacaggaaaacaactggagcccttagttgcacctctggcagatggaaaagtggccgtg
ggtcaggatgatctcaccgtggtgctcaatgaggagggcatctgcacacagaaatgtgcc
ctgaactggacggacataccagttgctatggagcaccagcctccctacatcattgcggtg
ttacctcgctatgtggagatccgaacgtttgagccaaggcttctggtccagagcattgaa
ttgcagaggcctcgtttcattacctcgggaggatccaacattatctacgtggccagcaat
cattttgtttggagactgattcctgttcccatggcgacccaaatccaacagcttctccag
gacaagcagtttgaattggctctgcagctggcagaaatgaaagaagattctgacagtgaa
aagcagcagcagatccatcacatcaagaacttgtatgccttcaacctcttctgccagaag
cgctttgatgagtccatgcaggtgtttgccaagcttggcacagatcccacccacgtgatg
ggcctgtaccctgacctgctgcccaccgactacaggaagcagctgcagtatcctaaccca
ctgcctgtgctctctggggctgagctggagaaggctcacttagctctgattgactacctg
acccagaaacgaagtcagttggtgaagaagttgcatgactctgatcaccagtccagcacc
tccccgctcatggaaggcactcccaccatcaagtccaagaagaagctgttgcaaatcatt
gacaccaccctgctcaagtgctacctccacaccaacgtggccctggtggcccccttgctg
cgtctggagaacaatcactgtcacatcgaagagagtgagcatgtgctgaagaaggcgcac
aagtacagtgaactgataatcctgtatgagaagaaagggcttcacgagaaggctctgcag
gtgctggtggaccagtccaagaaagccaactcccccctgaaaggccatgagaggacagtg
cagtacctgcagcacctgggcacagaaaacctgcacttgattttttcctactcagtgtgg
gtgctgagagacttcccagaagacggcctgaagatatttaccgaagatctcccagaagtg
gaggctctgccacgagatcgcgtgcttggcttcttaacagagaattttaaaggcctggct
attccttacctggaacatgtcatccacgtttggaaggagacgggctctcagttccacaac
tgcttgatccagctgtactgtgagaaggtgcaaggtctgatgaaggagtatctcctgtcc
ttcccagcaggccaaaccccagttcctgctggagaggaggagggagagctgggagaatac
cggcagaagctccttaggttcttggagatttccagctactacgatccaggccggctcatc
tgtgattttcctttcgatggcctcttagaagagcgagctctcctcttgggacgcatgggc
aaacacgaacaagccctcttcatctatgtccacgtcttgaaggataccaggatggctgag
gagtactgccacaagcattatgaccaaaacaaaaatggcaacaaagatgtgtatctgtcc
ctgctccggatgtacctgtcaccccccagcgttcactgcctggggccgatcaagctggag
ctgctggagctgctggagccgcaggccaacctccaggctgccctgcaggtcctcgagctg
caccacagcaagctggacaccaccaaggccctcaaccttctgccagccaacactcagatt
aatgatatacgcatctttctggaaaaggtcttagaagaaaatgcacaaaagaaacggttc
aatcaagttctcaagaaccttctccatgcagagttcctgagggtccaggaggagcgaatt
ttacaccagcaggtgaagtgcatcatcacagaggagaaggtgtgcatggtgtgcaagaag
aagatcgggaacagcgcgtttgcgagataccccaatggagtggtcgtacactacttctgt
tccaaagaggtgaacccggctgacacctga
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