Trichechus manatus latirostris (Florida manatee): 101356028
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Entry
101356028 CDS
T05135
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
101356028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101356028
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101356028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
101356028
NCBI-ProteinID:
XP_012409888
UniProt:
A0A2Y9FXR0
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MVCWRQAGGTEVLLAFRRGSFPQPEDSRVQGARGPRRGAPQARSRGPGEQPAAASRPPRR
PLAGCRRLTRPLAPGAGARGEQLHQLASGMGSVKRSLKKMLHLGEKEPQGVVYEGVEVDT
DAGKDSVKMILERRAYRLQNIIKKRSRSSQHDDVNASPLHHAAAEGQVELMETIMNDSCC
DVLNVMDNYGNTPLHWAAEKNQVESVTFLLGRGANPNLRNNSVMAPLHMAVQCCHNEVVK
VLTEHRSTNINLGGENGNTAVIIACSKDNSEALQILFSKGAKPCIPNKWGCFPIHQAVFS
GAKKCMEIVLKFGEEHGHSRQCHINFVDKGKHSPLHMAVQSGDLEMIKMCLDNGAKIDLR
EKGKCTALHFAATQGATEIVKLMISSYSGDSDIVNAVDGNQETLLHRVSLFDHYELADYL
ISMGADINSIDSEGRSPLLLATASASWNIVNLLLSKGAQVDIKDHLGRNFLHLTVQQRYG
LKNLRPEFMQMQHIKELVMDEDNNGCTPLHYACRQGVPVSVNNLLHFNVSIHSKSKDKKS
PLHFAASYGRINTCQRLLQDIPDMRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALL
LSDHNGWTPLHHASIGGYTQTMKVILDTNLKCTDQLDEEGNTALHLAAGEGHAKAVALLL
SYNAEIVLNKQDASFLHVAIHNRRKEVVLTTIRNRRWEECLKTFSHYSQSNKCPIIEMVE
YLPECMKVLLDVCMLHSTGDKSCQDYHIEYNFKYLQCPLELTKKITPVNDVTYEPLSTLN
AMVQHNRVELLNHPVCKEYLYMKWLAYGFRAHIMNLGSYCLGLIPMTFLVINIKPGMGFN
SAGIINETSNHSEMLDTKNSYFIKVCMILVFLSSIFGYCKEVAQIFQQKRSYLWDHSNAV
EWVIYTMSIIFVLPLFVGIPAHVQWQCGAIAIFLYWMNFLLYLQRFETCGIFIVMLEVIM
KTLLRSTVVFIFLLLAFGLSFYVLLNVQDAFSNPLLSIIQIFSMMLGDVNYRDSFLEPFL
RNELSYPILSFIQLITFTMFVPIVLMNLLIGLAVGDIAEVQKHASLKRIAMQVKLHTSLE
KKLPLYFLRKVDQQNIIVYPNRPKYQGGLICIFHYMFSIQEARQETPNDDTSLETEILKQ
KYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNHSSFQDKFKKEQLEQRNSKWNSVL
RAVKEKTQCSPH
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgctggagacaggcaggagggacagaagttctcttggcttttcgcagagggagc
tttccgcagcccgaggactccagggtgcagggagctcggggccccaggcgcggagccccc
caggcgcggagccgcgggccgggtgagcagccagccgccgcctcccggccgcctcgccgc
cctttggccgggtgccggcggctcacgcgccctctcgcacctggtgccggcgcccgcggg
gagcagctgcaccagctggcgtccgggatggggtcagtgaagcgcagcctgaagaagatg
ctgcaccttggcgagaaggagccccagggcgtagtctacgagggcgtggaggtggacacg
gacgccggcaaggactccgttaagatgattcttgaaagacgtgcatatagattacaaaac
atcatcaagaaacgaagcagatcaagccaacatgatgatgtgaacgcctcccctttgcac
cacgctgcagcggaaggtcaagtagagctgatggagacgatcatgaatgactcctgctgt
gacgtgctaaatgtgatggataattatggaaatacccctctgcactgggctgcagaaaaa
aaccaggtcgaaagcgttacatttcttctcggcagaggggcaaaccctaacctcagaaac
aacagcgtgatggcaccgctccacatggccgtgcaatgttgtcacaacgaggtggtgaag
gtcttaactgagcacagaagtactaatattaatttgggaggagaaaatggaaacacggct
gtgataattgcctgctccaaagataatagtgaagcactacaaattttgtttagtaaagga
gctaagccatgcataccaaataaatggggatgtttccctattcaccaggctgtgttttca
ggcgccaaaaaatgcatggaaatagtattaaagtttggtgaagaacatggacacagcaga
cagtgccatattaattttgtcgataaggggaaacacagccctctccacatggcggttcaa
agtggcgacttggaaatgatcaaaatgtgcctggacaatggtgcaaagatagatctgcgg
gagaaagggaagtgcacagctcttcattttgctgccactcagggagccacggaaattgtt
aaactgatgatatcctcctattctggtgatagtgatattgttaacgcagtggacggaaat
caagagacgctgcttcacagggtctcattgtttgatcactatgaacttgcagactattta
atttcaatgggagcagatattaatagcattgattccgaaggacgttctccacttctatta
gcaactgcttctgcatcttggaatattgtgaatttgctactttctaaaggtgcccaagta
gacataaaagatcatctcggacgtaattttttgcatttgactgtacaacaacgttatgga
ttaaaaaatttacgacctgagtttatgcagatgcaacatattaaagagctggtcatggat
gaagacaacaatggttgtactcctctacattatgcgtgtagacagggcgttcctgtctct
gtaaataacctgcttcacttcaacgtgtccattcattccaaaagcaaagataagaaatca
ccgctgcattttgcagccagttatgggcgtatcaatacctgccagaggctcctgcaagac
atccccgatatgaggcttttgaatgaaggtgaccttcatggaatgacacctctccacttg
gcagcaaaaaacgggcatgataaagttgttcaacttctcctgaaaaagggggcattactc
ctcagtgaccacaatggctggactcctttgcatcatgcttctattggcgggtacacgcag
accatgaaggtcattcttgacaccaatttgaaatgcacagatcagctagatgaagaaggg
aacactgcgcttcacttggctgcaggggagggccacgccaaagccgttgcacttcttctg
agctacaatgcggaaatcgtcctgaacaagcaggatgcctccttcttgcatgttgcaatt
cacaacagaaggaaggaggtggttcttaccaccatcaggaacagaagatgggaagaatgt
cttaagacatttagtcattattctcaaagtaataaatgtcccatcatagaaatggtggag
tacctccctgaatgcatgaaagtacttctggatgtctgcatgttacactccacaggggac
aagtcgtgccaagactatcatatcgagtataatttcaaataccttcaatgtccactagaa
ctcaccaaaaaaataactcctgtaaatgacgttacgtatgaacctctttcaacactcaat
gcaatggtacaacataaccgtgtagagcttctcaaccatcctgtttgtaaagaatattta
tatatgaaatggctggcttatgggtttagagcccatataatgaacctgggatcttactgt
cttggtctcatacctatgacctttcttgttatcaatataaagccaggaatgggtttcaac
tcagctggaatcatcaatgaaactagtaatcattcagaaatgttagacaccaagaattca
tattttataaaagtctgtatgatattagtttttttatcaagtatatttggatattgcaaa
gaagtggcccaaattttccaacagaaaagaagctacttgtgggatcatagcaatgcagtg
gaatgggttatctacacaatgagcatcatttttgtgttgcccttgttcgtgggtatacca
gctcatgtccagtggcagtgtggagcaattgctatattcttgtattggatgaacttctta
ttgtatcttcagagatttgagacttgtggaattttcattgttatgttggaggtgattatg
aaaaccttgttgaggtccaccgttgtgtttattttccttcttctggcttttggattgagc
ttctatgtccttctgaatgtacaggatgccttcagcaatccgttactctccattatccag
atcttcagtatgatgctcggagatgtcaattatcgtgattcttttctagaaccctttctg
aggaatgaattgtcatatcccattctgtcctttatacagcttattactttcacaatgttt
gttccaattgtcctcatgaatttactgattggtttggcggttggtgacattgctgaggtc
cagaaacacgcatcgttgaagaggattgccatgcaggtgaaacttcataccagcttagag
aagaaactgccgctctacttcctacgcaaagtggatcagcagaacatcatcgtctacccc
aacagacccaaataccaaggggggctaatatgtatatttcattatatgttctccatccaa
gaagcaaggcaagaaacaccaaatgatgatacatctttagaaacagaaatattgaagcag
aaataccggctaaaggatctcacttctcttctggaaaaacagcatgagctcattaaactt
atcattcagaagatggagatcatctcagaaacagaggatgaagataaccacagttctttt
caagacaagtttaaaaaagagcagttagaacaaaggaatagcaaatggaattctgtgttg
agagcagtaaaggaaaagacacagtgctctcctcattag
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