Trichechus manatus latirostris (Florida manatee): 101356144
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Entry
101356144 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 41
KO
K03730
class B basic helix-loop-helix protein 3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101356144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101356144
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
101356144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
101356144
NCBI-ProteinID:
XP_023593792
UniProt:
A0A2Y9RHA2
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MDEGIPHLQERQLLEHRDFIGLDYSSLYMCKPKRIMKRDDSKDTYKLPHRLIEKKRRDRI
NECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSL
KSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHAVATQFLPAPQLL
TQQVPLSKGTGAPSTAVSAGSAAVPCLERVGQKLEPLAHCVPVIQRTQPSAELAAENDTD
TDSGYGGEAEARPDREKGKGAGASRVTIKQEPPEEDSPAPKRMKLDXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPFAQPAAAAAPFCLPFYFLSPS
AAAAYMQPFLDKSGLEKYLYPAATAPFPLLYPGIPAPAAAAAAAAFPCLSSVLSPPPEKT
GAAAATLLPHEVAPPGALHPQHPHGRTHLPFAAPREPGKLESSAQEDPSQPRKETP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggaattcctcatttgcaagagagacagttactggaacatagagattttata
ggactggactattcctctttgtatatgtgtaaacccaaaaggatcatgaagcgagacgac
agcaaggatacctacaaattaccgcacagattaatagaaaagaaaaggagagaccgaatt
aatgaatgcattgctcaactgaaagatttactgcctgaacatctgaaattgacaactctg
gggcatctggagaaagcggtagtcttggagttaactttgaaacatttaaaagctttaaca
gccttaaccgagcagcagcatcagaagataattgctttacagaatggggagcgatctctg
aaatcgcctattcagtccgacttggatgcgttccactcgggatttcaaacatgcgccaaa
gaagtcttgcaatacctctcccgatttgaaagctggacgcccagggagccgcggtgtgtc
cagctgatcaaccacttgcacgccgtggccacccagttcttgcccgccccccagctattg
actcaacaggtcccactaagcaaaggcactggcgctccctcgaccgcagtatccgccggg
tccgctgcggtcccgtgcctggagcgcgttgggcagaagctggagcccctcgcccactgc
gtgccggtcatccagcggactcagcccagcgccgagctcgccgccgaaaacgacacggac
accgacagtggctacggcggcgaggccgaggcccggcccgatcgcgagaagggcaaaggc
gcgggggcgagccgcgtcaccatcaagcaggaaccccccgaggaggattcgccggcgccc
aagaggatgaagctggatnntnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgcccttc
gcgcagcccgcggccgcggcggcccccttctgcctgcccttctacttcctctcgccctcg
gcggccgccgcttacatgcagcccttcctggacaagagcggcctggagaagtacctgtat
ccggcagccaccgccccgttcccgcttctgtaccccggcatccccgccccggcggcggcg
gccgccgccgccgccttcccttgcctgtcctcggtgttgtcgccccctcccgagaagacg
ggcgcagccgccgcgaccctcctgccgcacgaagtggcgcccccaggggcgctgcacccc
caacacccgcacggccgcacccacctgcccttcgccgcaccccgcgagccggggaaactg
gagagctctgctcaggaagatccctcgcagccaagaaaggaaaccccctga
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