Trichechus manatus latirostris (Florida manatee): 101356311
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Entry
101356311 CDS
T05135
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101356311
09122 Translation
03013 Nucleocytoplasmic transport
101356311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101356311
03041 Spliceosome [BR:
tmu03041
]
101356311
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101356311
Spliceosome [BR:
tmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101356311
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
101356311
NCBI-ProteinID:
XP_004378970
UniProt:
A0A2Y9DQ39
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDMAVEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRESLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVSIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
HLTFCYLMNLNIMTVKAKVTTATELITPISASDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQYTVIADHSLSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAYEDYMELHFTKDIV
EAGLAEDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNNNDDNIRA
MESEVNVCYKELCGARPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcaagcaaaaaacggaagcccaaagtgatccgaagtgacggagcccca
gctgaagggaagcggaatcgatctgacactgagcaggaaggtaaatactacagtgaggag
gcagaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacatgccag
gagctgcagagactcatggctgagatccaggacctgaagagcaggggaggcaaggacatg
gcagttgagatcgaagaacgccggatccagagctgtgtgcatttcatgactctcaagaag
cttaaccgattagctcacatcaggttgaagaaaggaagagatcagactcacgaggcaaag
cagaaagtagatgcctatcatctgcagttacagaacctgttgtatgaggtgatgcacctt
cagaaggaaatcaccaaatgcctggaatttaagtcaaagcacgaagaaattgatctggtc
agtttagaggagttttataaggaggctcctccagatatcagcaaggctgaagtcaccatg
ggagatcctcatcagcaaacccttgcacgcctggactgggagctggagcagcggaaaagg
ctggcagagaagtacagagaaagtctgtccaacaaggagaaaatcctcaaggagattgag
gtgaaaaaggagtacctgagcagcctccagcctcgcctcaacagcatcatgcaggcatct
ctcccggtgcaggagtacctgttcatgccgttcgaccaggcccacaagcaatatgagaca
gccagacatctgccaccgcctctctatgttctctttgttcaggccactgcgtatggtcag
gcctgtgataaaacattgtctgtgtcgatcgaaggcagtgtggacgaagccaaggccctg
ttcaagcctcctgaggactcccaagatgacgagagtgactctgatgctgaagaggagcag
accacgaaacggcggcgacccacgctgggagttcagctggacgacaaacgcaaagagatg
ctgaagaggcacccactgtccgtcatgcttgacctgaagtgcaaagatgacagtgtgctt
cacctgaccttctgctacctcatgaacctcaacatcatgacagtaaaagccaaagtgaca
accgccacggagctcataacccccatcagtgccagtgacttgctgtctcctgactcagtc
ctgagctgtttgtatcctggggatcatggaaagaaaacgccaaatccagccaatcagtac
cagtttgataaagttggcatcctgactttgagagactatgtacttgacctgggtcatccc
tacctgtgggttcagaagctgggtggccttcacttccccaaagagcaaccacagtacacg
gtgatcgcggaccactcgctgagtgccagccacatggagaccaccatgaaactgctgaag
accagggtgcagtctcgcctggccctccataagcagtttgcgtccctggaacatggcatt
gtgccagttaccagtgattgccagtacctcttccctgcaaaggtggtctctcgcctggtg
aagtgggtgacgattgcctatgaggattacatggagctgcatttcaccaaagacattgtg
gaggcgggactagctgaggacaccaatctctactacatggcactcatcgaaaggggtaca
gccaagctccaggctgctgtggtgctgaaccctggctactcctccatcccacctgttttc
cagctctgtctgaactggaagggggagaagaccaacaacaacgatgacaacattcgggcc
atggagagcgaggtcaacgtgtgctataaggagctgtgcggtgcccggcccggccaccag
ctcttgaccaatcagctgcagcgcttatgcgtgctgctggacgtctacctggagactgag
agccacgatgacagtgtggaggggcccaaggagtttccccaggagaagatgtgtctgcgg
cttttcaggggtcccagtaggatgaagccgtttaaatataaccatcctcaaggattcttc
agccatcgctga
DBGET
integrated database retrieval system
