Trichechus manatus latirostris (Florida manatee): 101356386
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Entry
101356386 CDS
T05135
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04142
Lysosome
tmu04144
Endocytosis
tmu04721
Synaptic vesicle cycle
tmu04961
Endocrine and other factor-regulated calcium reabsorption
tmu05016
Huntington disease
tmu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101356386
04142 Lysosome
101356386
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
101356386
09156 Nervous system
04721 Synaptic vesicle cycle
101356386
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101356386
09164 Neurodegenerative disease
05016 Huntington disease
101356386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101356386
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tmu04147
]
101356386
Membrane trafficking [BR:
tmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101356386
Exosome [BR:
tmu04147
]
Exosomal proteins
Proteins found in most exosomes
101356386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
101356386
NCBI-ProteinID:
XP_004377915
UniProt:
A0A2Y9DNE3
LinkDB
All DBs
Position
Unknown
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLSLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatctccagcttcaaaatctgggtatt
aacccagcaaacattggcttcagtaccctgactatggagtcagacaaattcatctgcatt
agagaaaaagtaggagagcaggcccaggtggttatcattgatatgaatgacccaagtaat
ccaattcgaagaccaatttcagcagacagtgccatcatgaatccagctagcaaagtaatt
gcactgaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgatgtcaccttttggaaatggatctctttgaatacggttgct
cttgtcacggataatgcagtttatcattggagcatggaaggagagtctcagccagtgaaa
atgtttgatcgccattctagtcttgcagggtgccagataatcaattatcgtacagatgca
aagcaaaagtggttacttctaactggcatatctgcacagcaaaatcgtgtggtgggagct
atgcagctatattctgtagataggaaagtatcccagcccattgaaggacatgcggctagc
ttcgcacagtttaagatggaaggaaatgcagaagaatcaacattattttgtttcgcagta
cggggtcaagctggcgggaagttacatatcattgaagttggcacaccacctacagggaac
cagccttttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cctgtggcaatgcagatcagtgaaaaacatgatgtagtattcttgattactaagtatggt
tatatccacctctatgatcttgagactggtacctgcatctacatgaatagaatcagtgga
gaaacaatctttgttacggcacctcatgaagccacagctggaataattggagtcaacaga
aagggacaagttctttcagtgtgtgtggaagaagaaaacataattccctatatcaccaat
gtcctacaaaatcctgatctggctctgagaatggctgtacgtaacaacttagctggggct
gaggaactctttgcccggaaatttaatgctctttttgcccagggaaattactcagaggcg
gcaaaggtggctgctaatgcaccaaagggaatcctccgtactccagacaccatccgtcgg
ttccagagtgtcccagcccagccaggtcagacttctcctctgcttcagtactttggaatt
cttttggaccagggccagctgaacaagtatgaatcattagaactgtgtaggcctgtactt
cagcaagggcggaaacagcttttggagaaatggttgaaggaagataagctggagtgttct
gaagaactaggtgatcttgtgaaatctgtggaccctacattggcacttagtgtgtacctg
agggctaatgtcccaaataaagtcatccagtgctttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatatacaccggattggatctttctgctgagaaat
gtaatgcgtatcagtccagatcagggtcagcaatttgctcaaatgttggttcaggatgag
gagcctcttgctgatatcacacagattgtggatgtctttatggaatacaacctaattcag
cagtgcactgcgtttttgcttgatgccctaaagaataatcgcccatctgaaggtcctcta
cagacgcggttgcttgagatgaacctcatgcatgcacctcaggttgcggatgctattctg
gggaatcagatgttcacacattatgaccgggctcatattgctcagctgtgtgaaaaggct
ggcctactgcagcgtgctttggaacacttcactgacttatatgacataaagcgtgcagtt
gttcacacccaccttcttaaccctgagtggttagtgaattactttgggtccttatcagta
gaagactccctagaatgcctcagagccatgctgtctgccaatattcgtcagaatctgcag
atctgtgttcaggtggcttctaagtatcatgaacaactgtcaactcagtctctgattgaa
ctttttgaatcattcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaaatatattcaggcagcttgtaagactgggcag
atcaaagaagtagaaagaatttgcagagaaagcaactgctacgatccggaacgagtcaag
aattttctcaaggaagcaaagctaacagaccagttaccacttatcatcgtgtgtgatcga
tttgactttgtccatgatttggtgctctatttatatagaaataatcttcaaaaatatata
gagatatatgtacagaaggtgaatcccagtcgacttcctgtggttattggaggattactt
gatgttgattgctctgaagatgtcattaaaaacttgattcttgttgtaagaggtcaattt
tctactgatgagcttgttgctgaggttgaaaaaagaaaccgactgaaactccttttgcct
tggctagaggccagaattcatgaaggctgtgaggagcctgccactcacaatgcactagcc
aaaatctatatagatagtaataacaatccagagagatttcttcgtgaaaatccctattat
gacagtcgtgttgttggaaagtattgtgagaagagagatccacacctggcatgtgttgct
tatgaacgtggccagtgtgatctggaacttattaatgtttgcaatgagaattccctcttc
aaaagtctctcccgctacctggtacgtcgaaaggatccagaattgtggggtagtgtgcta
ctggaaagcaatccttacaggagacccctaattgaccaggttgtacagacagccttgtct
gagactcaggatcctgaagaagtatcagtaactgtcaaggcttttatgactgcagacctt
cccaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatctgcaaaacctccttatcctgactgcaattaaagccgatcgtacgcgtgtt
atggaatatattaacagactggataattatgatgccccagatattgccaatattgccatc
agcaatgagctgtttgaagaagcctttgccatttttcggaaatttgatgtcaatacttcg
gcagtgcaggtcttaattgaacatattggaaatttggatcgggcatatgagtttgctgaa
cgctgcaatgaaccagcagtctggagtcagcttgcaaaagcccagttgcagaaaggaatg
gtgaaagaagccattgattcttacatcaaagcagatgatccttcatcctacatggaagtt
gttcaggctgccaatactagtggaaattgggaagaacttgtgaagtacttgcagatggct
cgtaagaaggctcgagagtcctatgtggagacagaattgatatttgcgctggctaaaaca
aatcgccttgcagagttagaagagttcatcaatgggccaaacaatgctcatatccaacaa
gttggtgaccgttgttacgatgaaaaaatgtatgatgcggctaagttgttgtacaataat
gtttctaattttggacgcctggcatctacgctggttcacctgggtgaatatcaggcagct
gttgatggagctaggaaagctaacagtactcgaacatggaaagaggtctgctttgcttgt
gtggatgggaaagagttccgactggctcagatgtgtgggcttcatattgtagtacatgca
gatgaattagaggaacttatcaactactatcaggatcgtggatattttgaagaactgata
accatgttggaagcagctttgggacttgagcgagctcacatggggatgtttaccgaatta
gctattctatattctaaatttaagccacagaaaatgagggagcacctagagctgttctgg
tctagagtgaatatacctaaggtgctaagagctgcagaacaagctcatctttgggcagaa
ctggtgtttttgtatgataagtatgaagaatatgataatgccataattaccatgatgaat
catccaactgatgcatggaaagaagggcagttcaaagatatcattaccaaggttgccaat
gtggaactatactacagagcaatacagttctacttagaattcaagcctctcttattaaat
gatttgctgatggtgctgtctccacggttggaccatactcgtgcggtcaattatttcagc
aaggtgaaacagctttctctggtgaaaccgtatctgcgttcagttcagaaccacaacaac
aaatctgtgaatgaatccctgaacaacctctttattacagaagaggattaccaggctctg
cgaacatctatagatgcttatgacaactttgacaatatctcacttgctcagcgcttggaa
aaacacgaactcattgaattcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagtgtagagctgtgcaagaaagacagcctctacaaggatgcaatgcagtat
gcctctgagtctaaagatactgaattggctgaagaactcctacagtggtttttacaggaa
gaaaaaagagagtgctttggagcctgtctctttacctgttatgatcttttaaggccagat
gttgtcctggaaactgcatggaggcacaatatcatggattttgccatgccctatttcatc
caggtcatgaaagaatacttgacaaaggtggataaattagatgcttcagaatcactgaga
aaagaagaggaacaagctacagagacacaacctattgtttatggtcagcctcagttgatg
ctgacagcaggacccagtgttgcagtccctccccaggcaccttttggttatggttatact
gccccaccctatgggcagccacagcctggcttcgggtacagcatgtaa
DBGET
integrated database retrieval system
