Trichechus manatus latirostris (Florida manatee): 101356422
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Entry
101356422 CDS
T05135
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101356422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101356422
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101356422
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101356422
RNA polymerase I system
101356422
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
101356422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
101356422
NCBI-ProteinID:
XP_023598069
UniProt:
A0A2Y9S137
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEEE
DDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKVEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNTHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGTRRPGGMTSAYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEV
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctctgaggaggacagtgagcgcagcagcgacggc
gaggaggccgaggtagaggaggagcgacggagtgcggcgggcagtgagaaggaggaagag
ccggaggaagaagaggaggaggaagaggaggaggaatatgatgaggaagaggaggaggaa
gatgatgaccggccccccaagaaaccccgccatggaggcttcattctggatgaggccgat
gtggatgatgagtatgaggatgaggaccagtgggaggatggagcagaggacatcctagag
aaagtagaagagattgaagcctccaatatcgataacgttgtcctggacgaagaccgttct
ggggctcgccgcctacagaacctctggagggaccagcgagaggaagagctgggcgagtat
tacatgaagaaatatgccaagtcctcggtgggagagacggtgtacggcggatctgatgag
ctctcggatgacatcacccagcagcagctgctcccgggagttaaggaccccaacctgtgg
actgtcaagtgtaagattggggaggaacgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcggtggtggccccagaacac
gtgaagggctacatctatgtggaggcatacaagcagacccacgtgaagcaggccatcgag
ggtgtgggcaacctgcggctcggctactggaaccagcagatggtgcccatcaaggagatg
acggacgtgctcaaggtggtgaaggaggtggccaacctgaagccgaagtcctgggtccgc
ctcaagcggggtatctataaggatgacatcgctcaggtggattatgtggagcccagccag
aacaccatctccctgaagatgatcccgcgcattgactatgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcgaccgccgcagaggctgttt
gatgctgagaagatcaggtccctggggggcgatgttgcctctgatggtgacttcctcatc
ttcgaggggaatcgttacagccggaagggctttctgttcaagagcttcgcaatgtctgcc
gtgatcacagagggtgtgaagcccacactctccgagctggagaagtttgaggaccagcca
gagggcattgacctggaggtggtgactgagagcacagggaaggagcgggagcacaacttc
cagccgggggacaacgtggaggtgtgcgagggtgagctcatcaacctgcagggcaagatc
ctcagcgtggatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggatatg
ctggagttcccagcccaggaactgcggaaatacttcaagatgggggaccacgtgaaggtg
attgccggccgattcgagggtgacacaggcctcatcgtgcgggtggaggagaactttgtc
atcctcttctccgacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacggcatcgggcgtggacgtggggggccaacatgagtggggcgagctggtg
cagctcgacccacagaccgtgggcgtcatcgtgcggctggagcgagagaccttccaggtg
ctgaacatgtacgggaaggtggtgactgtcaggcaccaggccgtgacccggaagaaggac
aaccgcttcgccgtggccctggactcggagcagaacaacacccatgtgaaagacatcgtc
aaggtcatcgacggcccccactcaggccgggagggcgagatccgccatctcttccgcagc
tttgccttcctgcactgcaagaaactggtggagaacgggggcatgtttgtctgcaagacc
cgccacctggtgcttgcagggggctcgaagccccgagatgtgaccaacttcaccgtgggc
ggctttgcccctatgagcccccggatcagcagccccatgcaccccagtgctggaggtcag
cgcggcggctttggtagcccgggcggcggtggtggcggcatgagccggggccgcggacgg
agagacaatgagctcatcggccagactgtgcgcatctcccaagggccctacaaaggctac
atcggcgtggtaaaggatgccactgagtccacggctcgcgtggagctgcactccacctgc
cagaccatctctgtggaccgccagcggctcaccacggtgggcacacggcgcccgggcggc
atgacctcagcctacgggcggacacccatgtacggctcccagacacccatgtacggctcc
ggctctcgcacgcccatgtatggctcgcagacgcctctccaggacggcagccgcaccccg
cattacggctcgcagacgcccctgcatgatggcagccgcacgcctgcccagagtggggcc
tgggaccccaacaaccctaacacaccatcacgggctgaggaagagtacgagtacgccttt
gacgacgagcccaccccatcaccgcaggcctacgggggaacccccaatccccaaacaccg
ggctatcccgacccctcatccccgcaggtcaacccgcagtacaacccacagacgccaggc
acgccggccatgtacaacacagaccagttctcaccctatgccgccccctccccacaaggc
tcctaccagcccagccccagtccccagagctaccaccaggtggcgccaagccccgcaggc
taccagaacacccactctccggccagctaccacccaacaccctcgcccatggcctatcag
gccagccccagccctagccctgttggttacagtccgatgacgcccggagccccctcccct
ggtggttacaacccgcacacaccgggctcaggcatcgagcagaactccagtgactgggtg
accactgacatccaggtgaaggtgcgggacacctacctggatacacaggtggtggggcag
accggcgtcatccgcagcgtcacgggcggcatgtgctccgtgtacctgaaggacagtgag
aaggtggtcagcatctccagtgagcacctggagcccatcacccctaccaagaacaataag
gtgaaggtcatcctgggtgaggaccgggaagccacaggtgtcctgctgagcatcgatggt
gaggacggcattgtccggatggaccttgatgaacagctcaagatcctcaacctgcgcttc
ctagggaagctgctggaggtctaa
DBGET
integrated database retrieval system
