Trichechus manatus latirostris (Florida manatee): 101356483
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Entry
101356483 CDS
T05135
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04390
Hippo signaling pathway
tmu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
101356483
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101356483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101356483
Transcription factors [BR:
tmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101356483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
101356483
NCBI-ProteinID:
XP_023592536
UniProt:
A0A2Y9RGC5
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKE
HPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGANSMASGVGVGAGLGAGVNQRMDSYAHMN
GWSNGSYSVMQEQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYS
MSYSQQATPGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVP
EPAAPSRLHVSQHYQSGPVPGTAINGTLPLSHM
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttcatggtgtggtcgcgcgggcagcggcgcaagatggcccaggagaacccc
aagatgcacaactcggagatcagcaagcgcctgggcgcggagtggaaacttttgtcggag
acggagaagcggccgttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggag
cacccggattataaataccggccgcggcggaaaaccaagacgctgatgaagaaggataag
tacacgctgcccggcgggctgctggcgccgggcgccaacagcatggccagcggcgtcggg
gtgggcgccggcctgggcgcgggcgtcaaccagcgcatggacagctacgcgcacatgaac
ggctggagcaacggcagctacagcgtgatgcaggagcagctgggctacccgcagcacccg
ggcctcaacgcgcacggcgcggcgcagatgcagcccatgcaccgctacgacgtcagcgcc
ctgcagtacaactccatgaccagctcgcagacctacatgaacggttcgcccacctacagc
atgtcctactcgcagcaggccacccccggcatggccctgggctccatgggctcggtggtc
aagtccgaggccagctccagcccccccgtggttacctcttcctcccattccagggcgccc
tgccaggccggggacctccgggacatgatcagcatgtacctgcccggcgccgaggtgccc
gagcccgccgcccccagcagactgcacgtgtcccagcactaccagagcggcccggtgccg
ggcacggccattaacggcacactgcctctctcgcacatgtga
DBGET
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