Trichechus manatus latirostris (Florida manatee): 101356504
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Entry
101356504 CDS
T05135
Name
(RefSeq) protein scribble homolog isoform X2
KO
K16175
protein scribble
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04390
Hippo signaling pathway
tmu04530
Tight junction
tmu05165
Human papillomavirus infection
tmu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
101356504
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101356504
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101356504
09172 Infectious disease: viral
05165 Human papillomavirus infection
101356504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Pept_S41_N_bact
AbLIM_anchor
MscS_porin
Motif
Other DBs
NCBI-GeneID:
101356504
NCBI-ProteinID:
XP_004387438
UniProt:
A0A2Y9E6Q5
LinkDB
All DBs
Position
Unknown
AA seq
1609 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELG
GLALLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEMTEAIGDCENLSELILTENL
LTALPRSLGKLTKLTNLNADRNRLEGLPPEIGGCAALSVLSLRDNRLAVLPPELAHTAEL
HVLDVAGNRLQSLPFALTHLNLKALWLAENQAQPMLRFQTEDDVQTGEKVLTCYLLPQQP
SPTLEDPAQRSSPSENWSDTPLSRVSVIQFLEAPAGDEDAEEAASETRGLQRRATPHPSE
LKVMKRGIEERRSEVTPCKLGPRSRSPSEEEKRLSTESGLSEASHPSVSTGSEREPEGPL
AEAEDLDQLEATAASPEEDMEENYEEPTVHFAEDTLLPRGDSEDEEEQLEAPRPLLGGRQ
RLIRKDTPHYKKHFKVSKLPQPEAVVALLQGMRPDGEGQAGPGGWHNGPHTPWVPQAEEE
EEEEEEAAACAPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQTGGLGISIAGGKGSSP
YKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQSAEHQEAVEALRGAGATVRMR
VWRERMVEPENAVTVTPLRPEDDYSPRERRGGGLRLPLPQPEAPGPLRQRHAACLVRSEK
GLGFSIAGGKGSTPYRAGDAGIFISRIAEGGAAHRAGTLQVGDRVLSINGVDMTEARHEH
AVSLLTAASPTITLLLERETGAPPPPSPPPHSPPLPAAASTPTTATAGEPGPPRLAPSLL
AAALEGPYPVEEIRLPRAGGPLGLSIVGGSDHSSHPFGVQEPGVFISKVLPRGLAARSGL
RVGDRILAVNGQDVREATHQEAVSALLRPCLELRLLVRRDPPPPGMRELCIQKAPGEKLG
ISIRGGAKGHAGNPCDPTDEGVFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHSE
AVQLLRSVGDALTVLVCDGFDSSATAALEVSPGVIANPFAAGIGRRNSLESISSIDRELS
PEGPGKDKELAGQNPARELEATEATGRSPEPLKLDYRALAAVPSGGSVQRVPSGVTGAQT
DEAPCSPGGQQPSSTPPSPDELPANVKQAYRTFAAVPITHPPDDASVQPSTPGPAASPEQ
LSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEEAVAAGGPETGPALDGEAP
DEQEEEPPWAGPGPAGGLSPASPPPLGGGAPVRTAKAERRHQERLRVQSPELPVPERALS
PAERRALEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRGKRGPLERLAEAPSPAPTP
SPTPLEDLGLQTSTSPGRLFLSGKKFDYRVFAALPSSRPVYDIQSPDFAEELRSLEESPS
PGPQEEDGEVALVLLGRPSSSASGPEEVTLCSSRRPVRPGRRGLGPVPS
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatccctctgtggcgctgcaaccggcacgtggagtcggtggaccggcgg
cactgctcactgcaggccgtgccggaggagatctaccgctacagccgcagcctggaggag
ctgctcctggacgccaaccagctgcgcgagctgcccaagcctttcttccgcctgctaaat
ctgcgtaagctgggcctcagcgacaacgagatccagcgcctgccgcccgaggtggccaat
ttcatgcagctggtggagctggacgtgtctcggaacgacatccccgagatccctgaaagc
atcaagttctgtaaagccttggagattgctgacttcagcgggaatcctctgtccaggctc
cctgacggcttcactcagctgcgcagcctggcccacctggccctgaacgacgtgtccctg
caggcgctgccgggggatgtgggcaaccttgccaacctggtgaccctggagctccgggag
aacctgctcaagtccctgcctgcgtccctctccttcctggtcaagctggaacagctggat
cttggaggcaatgatctggaagtgctgcccgacactctcggggctctgcccaacctgcga
gagctgtggctggaccggaaccagctgtcagcactacccccggagctcgggaacctgcgg
cgcctcgtgtgcctggacgtgtcagagaaccggctggaggagctacctgcggagctgggt
gggctggcactgctcacggacctgctgctgtcccagaacctgctgcagcggttgcctgat
ggcattggccagctgaaacagctgtccatcctgaaggtggaccagaaccgcctgtgtgag
atgaccgaggccatcggggactgcgagaacctgtctgagctgatcctgactgagaacctc
ctgacggccctgccgcgatccctggggaagctgaccaagctgacaaacctcaacgcggac
cggaaccgcctggaggggctgccacccgagatcggcggctgtgcggctctcagcgtgctc
tcgttgagggacaaccgcttggccgtcctgcctcctgagctcgcccacacggccgagctg
catgtgctggatgtggctgggaaccggctgcagagtctgccgttcgcgctcacccacctc
aacctcaaggccctgtggctggcggagaaccaggcacagcccatgctgcgcttccagacg
gaggatgacgtgcagacgggcgagaaggtgctcacgtgctatttgctgccccagcagccc
tcacccactctcgaggatccagcgcagcggagcagcccctctgagaactggagcgacacc
ccgctgagccgcgtcagcgtcatccagttcctggaggcacccgcgggcgacgaggatgcc
gaggaggccgcttccgagacgcggggcctgcagcgccgtgccacgcctcaccccagcgag
ctcaaggtgatgaaaagggggatcgaagagcgccggagcgaggtcaccccctgcaagctg
ggccccaggtcacgctcgccctcagaagaggagaagcggctgagcactgagtctgggctg
agcgaagcctcacacccatccgtcagcaccggctctgagcgggagcctgagggcccgctg
gctgaggcggaggacctggaccagctggaggccacggcagccagcccagaggaggacatg
gaggagaactacgaggagcccacagtgcacttcgcggaggacacgctgttgccacggggg
gatagtgaggatgaagaggagcaactcgaggccccccggcccctcctgggagggcgacag
cggctcatccgcaaggacacgcctcattacaagaagcacttcaaggtctcgaagctgccg
cagcccgaggcagttgtggccctgctgcaggggatgcggccggacggcgagggccaggcc
gggcctggcggttggcacaatggcccccacacgccctgggttcctcaggctgaggaggaa
gaggaggaggaagaggaggccgcagcctgtgcaccctccgtcaagggggtgtcgtttgac
caggccaataacctgctgatagagcctgcccgcattgaggaagaggagctgacgctcacc
atcgtgcggcagacggggggcctgggtatcagcatcgcagggggcaagggttccagccct
tataagggagacgatgagggcatattcatctcccgcgtgtcggaggagggccccgcagcc
cgtgccggagtccgggtgggggacaagctcctggaggtgaacggcgtggccctgcagagc
gcagagcaccaggaggccgtggaggccctgcggggggcgggcgccaccgtgcggatgcga
gtgtggcgggagcgcatggtggagccggagaacgcagtcacggtcacgcctctgcggccc
gaggacgactacagcccccgggagaggcgagggggcggcctgcgcttgcccctgccccag
cctgaggcccccgggcccctgcgccagcgtcacgccgcttgtctcgtgcgcagcgagaag
gggctgggcttcagcatcgctggcgggaaaggctccactccctaccgggctggcgacgca
ggcattttcatctcgcgcatcgcagaaggcggtgctgcccaccgggcgggcaccctgcag
gttggcgaccgcgtcctctcgatcaacggcgtggacatgacggaggcccggcacgagcac
gctgtgtccctgctgactgccgcctcgcccaccatcaccctgctgctggagcgggagact
ggggcgcccccgccccccagccctcccccgcactcgccaccgctccccgctgctgcctcc
accccaaccactgccaccgccggggagcctgggccgccaaggctggctcccagcctgctg
gctgctgccctggaggggccctatccagtggaggagatccggctgcccagagcggggggc
ccgctggggctcagcattgtcgggggctctgaccactcgagccacccgtttggtgtgcag
gagccgggagtgttcatttccaaggtgctcccaagaggcctggctgcgcgcagcggcctc
cgggtcggggaccgcatcctggcggtcaatgggcaggacgtgcgggaagccacgcaccag
gaggcagtcagcgccctactccggccctgcctggagctgcgcctgctcgtgcgcagggac
ccaccacccccaggcatgagggagctctgcatccagaaggctccgggagagaagctgggg
atcagcatccgtgggggcgccaagggccacgcagggaacccctgtgaccccactgatgag
ggtgttttcatttccaaggtgagccccacaggggcagcgggccgggacggccggctgcgg
gtggggctacgactgctggaggtgaaccagcagagcttgctgggtctgacgcactccgag
gccgtgcagctgctgcggagcgtgggcgatgccctcaccgtgctcgtctgtgatggcttc
gacagcagcgccaccgctgctctggaggtgtccccaggtgtcatcgccaacccttttgcg
gcaggcatcggccgccggaacagcctggagagcatctcgtccattgaccgtgagctgagc
cccgagggccctggcaaggacaaggagctggctggacagaacccagcacgggaactagag
gccacagaggccacaggtcggagcccagagccgctgaagctggactaccgcgccctggcc
gcagtgccaagtggtggcagcgtgcagagggtgccgtcaggggtcactggagctcagact
gacgaggccccctgctctcctggtggccagcagccgtcgtcgaccccgccctccccggac
gagctgcccgccaacgtgaagcaagcctaccggacattcgccgccgtgcccatcacgcac
ccgcccgacgacgcctcagtccagccctccacgccggggcccgcggcctccccggagcaa
ctgtccttccgcgagcggcaaaagtacttcgaactggaggtgcgggtgccccaggcggag
ggcccgcccaagcgcgtgtccctagtgggcgccgatgacctgcgcaagatgcaggaggag
gaggaggccgtcgccgccgggggtccggaaacagggcccgccctggacggggaggccccg
gacgagcaggaggaggagccgccctgggccggcccgggccctgcgggagggctcagcccg
gcgtcccctccgcccctgggaggcggcgccccggtgcggacggccaaggccgagaggcgc
catcaggagcggctgcgcgtgcagagcccagaactgcctgtgcctgagcgggccctgtcc
cctgctgagcgccgggccctggaggcggagaagagagcgctgtggagggcagccaggatg
aagtctctggagcaggatgccctccgtgcacagatggttctcagcaagtcccaagagggc
cgcggcaagcgtgggcccctggagcggctggctgaagccccctcgcctgcgcccaccccc
tcccccacccccttggaagacctcggccttcagaccagcacctctcctggacggctgttc
ttgtctggaaagaagtttgactacagggtgttcgcagccctcccttcttccagacctgtc
tatgacatccagtccccagattttgctgaggagctgaggtctttggaagagtctccaagc
cccggtccacaggaggaggacggagaggtggccctggtgcttctgggcaggccctcatcc
agcgcctccggccctgaggaggtgacgctttgcagcagccgccgccctgtgcggcccgga
cgccgtggtctgggccccgtgccttcctag
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integrated database retrieval system
