Trichechus manatus latirostris (Florida manatee): 101356511
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Entry
101356511 CDS
T05135
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101356511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101356511
Membrane trafficking [BR:
tmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101356511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
101356511
NCBI-ProteinID:
XP_004369359
UniProt:
A0A2Y9D7K1
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MMTIKAFSLVSAVERELLMGDRDRINIECVECCGKNLYVGTNDCFIYHFLLEEKTLPTGT
AAFTATKQLHRHLGFKKPVNELRAASALNRLLVLCDNSITLVNMMNLEPIPTGARIKGAV
TFALNENPVSGDPFCVEVCIISVKRRTIQVFMVYEDRVQIVKEVSTPEQPFAVAVDGHFL
CLALTTQYIILNYNTGVSQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVT
TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGVRRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFPEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHNSLLDLLVTENFCLLTDSA
VWLEKHKKYFALGLLYHYNNQDAAALQLWVNIVNGDICDSTRSDLYEYVVDFLTYCLDHE
LVWKYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPEDVISCLKKYPKALVRYLEHLVID
RRLQKEEYHTHLALLYLEEVLQQRPSANGKGAEVTEMQAKLRSLLQKSDLYRVHFLIDKI
QGTGLHMESAILHGKLEEHEKALCILVHELKDFAAAEDYCLWSSEGRGDPYRQRLFHTLL
AIYLRGDPSDCELVVPAVDLLNHHATEFDAAEVLQLLPDTWSVQLLCPFLTGAMRHSIHT
KRMTQVALGLAKSENLIYKYSKMKLKGSSVQLSDKKLCQVCQNPFCKPVFVKYPNGGLVH
THCAANRHTNQNSPSPGNRT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccatcaaggcctttagcttggtctctgctgttgagcgggagctgctgatgggc
gacagagatcgcatcaatatagagtgtgttgagtgctgtgggaagaacctctacgttggc
accaatgactgctttatttaccacttcctgttggaggagaagactttgcccactgggaca
gccgcattcactgccactaaacagctgcacagacacctgggtttcaagaagccagtgaat
gaactgagagcagcgtcagccctcaacaggctcctggtgctctgtgacaactccataact
ctggttaacatgatgaacctggagcccattcccacaggggcccgaatcaaaggggcagtg
acatttgctttgaatgagaaccctgtgagcggggacccattttgtgtggaagtttgtatc
atctctgtcaaacgcagaaccatccaggtgttcatggtctacgaggaccgggttcagata
gtcaaggaagtgtcgactccagagcagccctttgccgtggctgtggatggccacttctta
tgcctggctcttaccactcagtacatcatcctgaactataacacgggggtctcccaggac
ctgtttccttactgcagcgaagagaagcgcccgattgtgaagcggataggcagacaggag
ttcctgttggcaggcccgggaggactgggcatgtttgcaacagtagctggaatatcccag
cgtgcccctgtgcactggtcagagaacgtgatcggagcagccgtttgctttccgtatgtc
atagctcttgatgatgaattcatcacagttcacagcatgttggatcagcagcaaaagcag
accctgccttttaaggaaggccacattctacaggattttgaaggaagagtgattgtcacc
accagtaaaggcgtttacatcttggttccattacctctggaaaaacaaatccaggacctt
ctggcaagtcgtagagtggaagaggcattggttttagcaaaaggagtccggaggaacatt
ccaaaagaaaaatttcaggtaatgtacagaaggattctgcagcaggcggggtttatacag
ttcgcacaacttcagttcccggaagctaaagagctcttcagaagcggccagcttgatgtc
cgggagctgatctctctctaccccttcctgttgcctacctcctcttcattcacacggtct
cacccccctctccatgagtatgcagacctgaaccagctgacccaaggcgaccaggagaag
atggccaagtgtaaacgcttcctcatgagctacttgaatgaagtccgcagcacagaggtg
gcaaacggctacaaagaagacatcgacacagccttgctcaagctgtacgccgaggctgac
cacaacagtctgctggacctcctggtcaccgagaacttctgtcttctaacagacagcgct
gtctggctggagaagcacaaaaagtattttgcactcggactgctctatcattataataac
caagacgctgctgccctgcagttatgggtgaacatcgtgaatggagatatctgtgactcg
actcgctcggacctgtatgagtatgtcgttgattttcttacctactgcttagaccacgaa
ctcgtgtggaagtacgctgactgggtgttgcagaaaagtgaggaggttggagttcaagtt
ttcaccaagagacctttggacgaacagcagaagaatagttttaatccagaggacgttatc
agttgccttaaaaaatacccgaaagcccttgtcagatatctggaacatctggttatagac
agaagactgcagaaggaagagtatcacactcacctagctctcctgtacctggaagaggtg
ctgcagcagagacccagcgccaacggcaagggtgcagaagtgactgagatgcaagcaaaa
ctacgaagtctactccagaaatccgacttatacagagtccactttctcatagataaaatc
caaggcaccggtcttcacatggagagtgccatcctccacgggaagctggaggagcacgag
aaggccctgtgcattctggtccatgagctgaaggacttcgcggctgcggaggactactgc
ctgtggagctctgagggcaggggcgacccctatcggcagcggctcttccacacgctgctt
gccatttacctccgcggggacccctcagactgtgagctcgtcgtgcccgctgtggacctc
ctgaatcaccacgccacagaatttgacgcagcggaagttttgcagctgctgcccgacacc
tggtcagtccagctcctctgcccattcctgacgggagccatgaggcacagtatccacacc
aagaggatgactcaagtggccctaggcttggccaaatccgaaaacttaatctacaaatac
agtaagatgaagttaaaaggaagctcagttcagctctcagacaaaaagctttgccaggtg
tgccaaaaccccttttgtaagcctgtgtttgttaaatatccgaatggcgggcttgtccac
acccactgtgctgcgaacagacatacgaaccagaactcaccgagccctggcaaccggact
tga
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