KEGG   Trichechus manatus latirostris (Florida manatee): 101356545
Entry
101356545         CDS       T05135                                 
Name
(RefSeq) roquin-2 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tmu03000]
    101356545
   04121 Ubiquitin system [BR:tmu04121]
    101356545
Transcription factors [BR:tmu03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    101356545
Ubiquitin system [BR:tmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101356545
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 Prok-RING_4 zf-C3HC4 zf_CCCH_4 zf-CCCH_UNK zf-C3HC4_4 zf-C3HC4_2 Xin
Other DBs
NCBI-GeneID: 101356545
NCBI-ProteinID: XP_023586456
UniProt: A0A2Y9QYZ4
LinkDB
Position
Unknown
AA seq 1189 aa
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEIAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGITNAENSVSPLIPRSTDSTLRGLETVKKVGKVGTNGQNAAGPSAE
SVTENKIGSPPKTPVSNIAVTSAGPPNVGTELNSVPPKSSPFVTRVPIYPQHSENIQYFQ
DPRTQIPFEVPQYAQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTPLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSYEEQIRRKPE
QWAQYHTQKAPLVSSALPVATQSPTPPSPLFAVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEVTS
SAHYVERDRFIVADLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGENDYTEDTTDTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISSQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQ
PLPVSISNASCLPVTTSASVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgcctgtacaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaattttgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttgagtaatctaggtgagaataaacactatgaaattgcaaagaaa
tgtgttgaagatttggcactctacttaaaaccactaagtggaggaaaaggtgtagctagt
ttgaaccagagtgcactgagccggccaatgcaaaggaaactggtgacacttgtcaactgt
caactggtagaagaagaaggtcgtgtaagagccatgcgagcagcccgttcacttggagaa
agaactgtaacagaactgatattacagcaccagaacccccagcaattgtctgccaacctg
tgggctgcagtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaaactggtgttgctggcattagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagcattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggtcaccaaaagggatgaagac
tcttccctgatgcaactgaaggaggaatttcggagttacgaagcgttacgcagagaacat
gatgcccagattgttcatattgctatggaagcaggacttcgtatttcaccagagcagtgg
tcctcacttctatatggtgacttagcacataaatcacacatgcagtctatcattgataag
ctccagtctccagaatcatttgcaaagagtgtccaggaactgacaattgttttacaacga
acaggtgacccagccaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gatcctaacccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatgggcttgtagatttcatacagaattatagtagaaaaggccat
gaaacacctcagcctcagccaaacagtaaatacaagactagcatgtgccgagatctacga
cagcaaggggggtgtccacgaggaacaaattgtacatttgcccattctcaggaagaactt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaactgggaaaattgttccaagtacaaatggaattacaaatgcagaa
aacagtgtttctccactaatcccacgtagtactgacagtacattaagaggcctggagacc
gtgaagaaagtggggaaagttggcactaatggtcagaatgctgctgggccttctgcagag
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaatatagcagtt
acctcagctgggccccctaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccatttgtaactagagtaccaatatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtaccacaatacgcacagactggatactaccca
ccacctccaacggtaccagctggtgtggctccctgcgttcctcgctttgtgaggtccaat
aatgtaccagagtcctccctcccacctgcttccgtgccgtatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtatgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcattcgtctgtctatcagacgcctttgcgggaaagatacaactcattagat
gggtattattcagtggcttgtcagccaccaagtgagccaaggacaaccgtgcctttacca
agggaaccttgtggtcatttgaagaccagttacgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcagctcttcctgtggca
acacagtcaccaacaccgccttctcctctattcgctgtagactttcgcactgatttctct
gagagtgtgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtct
tgtggcaccataggttcctgtataaatgccatcgattcagagcccaaagatgtaattgct
aattcaaatgctgtgttaatggacctggacagtggagatgttaagagaagagtacattta
tttgaaactcagagaagagcaaaagaagaagacccaataattccttttagtgacggacct
atcatctcaaaatggggtgcaatttccagatcttctcgtacaggttaccataccacagat
cctgtccaggccactgcttcccaaggaagtgcgactaagcccatcagcgtatcagattat
gtcccttatgttaatgctgttgattcaaggtggagttcatatggcaatgaggtcacgtca
tcagcacactatgttgaacgggacagattcattgttgctgatttatctggacatagaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcatta
cttcttcagagagaggccaatgctctggccatgcaacagaagtggaattccttggatgaa
ggtcgtcatcttactttaaatcttctaagcaaggaaattgaattaagaaatggagagaat
gattatacagaagatacaacagatactaagcctgatagggatattgaattagaactttca
gcacttgatacagatgaacctgatggacaaggtgaacaaattgaagagatcctggacata
caacttggtatcagttctcaaaatgatcagttgctgaatggaacagcagtggaaaatgga
catccagttcagcagcaccaaaaggagccactagagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag
ccacttccagtgtccattagcaatgcaagttgcctccccgtcaccacatctgccagtgtt
ggcaacctcatcctgaaaactcatgttatgtctgaggataaaaatgactttttaaaacct
gttgcaaatgggaaaatggttaacagctga

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