Trichechus manatus latirostris (Florida manatee): 101356609
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Entry
101356609 CDS
T05135
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K21869
ATP-dependent RNA helicase DDX53 [EC:
5.6.2.7
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmu03036
]
101356609
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101356609
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
101356609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
P-loop_SecA
KH-I_KHDC4-BBP
DUF7336
HEM4
Motif
Other DBs
NCBI-GeneID:
101356609
NCBI-ProteinID:
XP_012415462
UniProt:
A0A2Y9G237
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
PRASGSRESPLCFKLKNNMIGAVIGRGGSKIKDIQGTTNTRIHIIKGDTEAEVKIFGSHT
MKEKAKAIIETVVKKQEESYNCEYRVNTVAAQPSAGRDLSRNNVSREVQPPIDWDQIRVE
AAEWENKKWADLPPIQKNFYVESVSTSSMPQMQVDKWRQDNFNVMCNDLKDSGKRPIPNP
TCTFEDAFRSYPEIMASIKKAGFLKPTPIQAQAWPIVLQGIDLIGVAQTGTGKTLSYLMP
GFIHLKFQPTASHERKGPGMLVLTPTRELALQVEAECSKYSYEGLKSVCIYGGGNREAQI
HDVSKGVDIIIATPGRLNDLQMNNFVNLRSVTYLVLDEADKMLDLGFEHQIMKILLDVRP
DRQTIMTSATWPDGVRRLAQSYLKEPMIVYVGTLDLAAVNTVKQNIIITTEEKKRSLIQE
FLENMSPKDKVIIFVSRKLIADDLSSDLSIQGIPLQSMHSNRDQSDRERALEDFKSGKVK
ILIATDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGKTGTSVTLITQDDWKIA
TELITILKRTNQFVPDELVALAERYKAYKQHKETEKQSRKSQRKPKEFY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
cctagggcctctggctcccgtgaatcacctctctgctttaaattgaagaacaatatgatc
ggtgctgtgattggtcgcggtggatcgaaaatcaaggacatccaaggtacaacaaacact
agaattcacataataaaaggtgatactgaagcagaggtaaaaatttttggcagccatacc
atgaaagaaaaggccaaagcaatcatagaaactgttgttaaaaaacaagaggaaagttac
aattgcgaatacagggttaatacagttgctgcccagccttctgctggaagagatttaagt
agaaataatgtcagcagagaagttcagccaccgatagattgggatcaaattcgggtagag
gccgccgaatgggagaacaagaaatgggcagatttaccaccaattcagaaaaatttttac
gtagaatccgtatcaacaagttcaatgcctcagatgcaagtagataagtggagacaggat
aatttcaatgtaatgtgtaacgacttgaaagatagtggaaaacgtcctattcccaatcca
acctgtacttttgaagatgcctttagaagttatcctgaaattatggccagcattaaaaaa
gcaggttttctaaaaccaacaccaattcaggcacaggcatggccaattgttctacaagga
atagatcttataggagttgcccaaactggaacaggcaaaacactgtcctatttaatgcct
gggtttattcatctcaagtttcaaccaacagctagccacgaacgcaagggaccaggcatg
ctagtccttacacccactagagagttggcccttcaagtggaagctgaatgttctaagtat
tcatatgaaggtcttaaaagcgtttgtatatatggaggtggaaatagagaagcccaaata
cacgacgtttccaaaggtgtagatatcatcattgcaactcctggccgactaaatgatttg
caaatgaataactttgtcaatctaagaagcgtaacctatttggtgttagatgaggctgat
aaaatgctagacctagggtttgaacaccagataatgaagattttattagatgtgcgccca
gataggcagaccattatgactagtgcaacttggccagacggtgtccgtcgactagcacaa
tcttatttgaaagagcccatgattgtatatgtaggtactctggatctagctgcagtaaat
acagtgaaacaaaatataatcattaccacggaagaaaagaaacgatctcttatccaagag
tttctagaaaacatgtcacccaaagacaaagttatcatatttgtcagcagaaaacttatt
gctgatgacttgtcaagcgatttaagcatccagggtatacctcttcagtctatgcacagc
aacagagaccagagtgatcgtgagcgagcattagaggattttaaaagtggaaaagtgaaa
atactgatcgctaccgatttagcatcccggggccttgatgttcatgatatcacacacgta
tacaattacgattttccacggaatatcgaagagtatgtccacagagtggggcgcactgga
agagcagggaagactggcacatcggttacccttatcactcaagatgattggaaaatcgcc
actgagttgattacaattctgaaaagaacaaatcagtttgtcccagacgaacttgtggca
ctggctgagagatataaggcgtataaacaacacaaggaaacagaaaaacaatcaagaaaa
tctcaaagaaaacctaaggagttttattga
DBGET
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