Trichechus manatus latirostris (Florida manatee): 101356804
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Entry
101356804 CDS
T05135
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101356804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101356804
Membrane trafficking [BR:
tmu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101356804
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
101356804
RAVE complex
101356804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
MIOS_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
101356804
NCBI-ProteinID:
XP_004377026
UniProt:
A0A2Y9DLW3
LinkDB
All DBs
Position
Unknown
AA seq
3019 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVISVFEPVNLPKEKKNLESYSQWQKTGQFFLESIAHNITWDP
TGSRLLTGSSCLQLWSNTLEKPSENENPDKTDLNFGDWRCIWHCKTASQVHLMKFSPDGE
FFATAGKDDCLLKVWYNVENWRTAVTSPDRSSEKQSQGEIDFSFVYLAHPRSVNGFSWRK
TSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCNHWTEPVSLTNNFKRNAS
SKERVQSALEVNLRHFRRGRRRSLALVAHTGYLPHQQDPHHVHRNTPLHANALCHFHIAA
SINPATDIPLLPSITSLSLNEDEEKSGPFVVHWLNNKELHLTLSMEVFLQQLRKSFEQPS
SEASVEDCNQADVKSDEETDDGVDDLKINHGKKELGSDKMVPNSSLPSAAIDHQIEVLLS
EWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLCK
SIVMYACTKNVDLAIQQGKQKPSSLTHSTSMLISSSHSKSTNSLKLSIFTPNVMMISKHA
DGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNALRTP
DVDNQKQPYDGVSTEECSLGQQNQSTIDVVFQDPNAVYSELILWRVDPVGPLSFSGGVSE
LARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAKKLLY
ELSNPEISKYVGEVFNIVSQQSTARPGCIIALDPITKLHGRKTQLLHVFQEDFILNSIEK
KSLGKDSTVSDAGSSPNRFSEKFYLIVIECTQDNRSLLHMWNLHLKSIPVSLDEKIDTKI
PEAVWQPEDHYSSPENSPPAFSQKYQACRANLQSTSKLTLSSEMVYSQEFNLPEGVEIIS
VKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTGVESATSQNGKMDLVYIWEE
WPLLIEDGLQSNSSITVPGRPVEVSCAHTNRLAVAYKQPAYNSRSSQDFMMHVSIFECES
TGGSCWILEQTIHLDELSTVLDSGISIDSNLVAYNKQEVYLSSKEIITSNTKHLVHLDWM
SREDGSHILTVGIGSKLFMYGPLAGKVQEQTGKESLAFPLWESTKVVPLSKFVLLRSVDL
VSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEAVITDSYNGSTPSIISL
IKQSNSSSSGLHPPKKTLTRSMTSLAQKICGKKTAFDPSVDMEDSGLFEAAHALSPTLPQ
YHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAESNHERRLRSLTISASGSTTR
DPQAFNKSENTDYTEIDSVPPLPLYALLAADDDSCYPALEKSSNQSTLNKSNQLSNESYN
ELFQISALISDSHVLEADEENAKPRIIDLSQYSPTYFGPEHAQVLSGHLLHSSLPGLSRM
EQMSLMALADTIATTSTDIGESRDKSQGGETLDECGLKFLLAVRLHTFLTTSLPAYRAQL
LHQGLSTSHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRNTRNLRRCIEK
VAKAAFYRKSDPLDAAIFYLAMKKKAVIWGLYRSQKDAKMTQFFGHNFEDERWRKAALKN
AFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLYESEFDTSSTYKSI
LRKKVLGIDSLVHELNSLNINMHYDPFLRSMAYWILEDYGSALETLIRQPIREDDGQTMM
SACNPAVFNFYNYLRTHPLLLRRHIGSSDVFSTYMSLTGKNGLAGTINLSERRLFFTTAS
AHLKAGCPMLALEVLSKMPKVIKKTKPFCRTSSFLDTSKDCSPSSLKLDARDGKSSSIGW
SQSVMNGFGSSSEGSSEKQSNSTLSLDWSQPSVVFQDDSLELKWDSDNDEENEDLPISMK
ELKPLQRKISKKLDETSSNYTESLSTLDENDILSPSEDTIAVQLKFRACLKILTVELRTL
STGYEIDGGKLRYQLYHWLEKEVIALQRTCDYCSDVEELQSAFGETGDEFRLNEDAKDLP
HETKVKQLRENFQERRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQESQQE
TSEPVFPSPLSEQSSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIVNFDSPPHPDIQ
NNNVYVMHTLAASLSACIYQCLCGSHNYSSLQTNQFTGMVYQTVLLPHRHSLKTGSSDEA
VIPNTSPAQWPGITSLIQLLNSSGEEAHPGLTVLLCEILTAVYLSLFIHGLATHSSNELF
RIVAHPLNEKMWSAVFGGGAHVSSKEQTHSKGLSVSSLVEEGEKQNKHFRSSKMSCRESA
PLTSSSPPVSQESLVVKEKFIPPELSIWDYFIAKPFLTALQSRAEYDSEESLESDDDSDD
ILASDFHLQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSSPLCHAVLK
TLQCWEQVLLRRLEIHGGPPQNYIASHTSEESLSSGPAILRHKALLEPTNTPFKSKHHLA
LSVKRLWQYLVKQEEIQETFIRNIFTKKRCLNEIEADLGYPGGKARIIHKESDIITAFAV
NKANRNCIAIASSHDVQELDVSGILATQIYTWVDDDIEMETKGSEDFLVIHARDDLTAVQ
GTTPYTHSNPGTPINMPWLGSTQTGRGASVMIKKAINNVRRMTSHPTLPYYLTGAQDGSV
RMFEWGHSQQITCFRSGGNSRVTRMRFNYQGNKFGIVDADGYLSLYQTNWKCCTVTGSIP
KPYLTWQCHNKTANDFVFVSSSSLIATAGLSTDNRNICLWDTLVAPANSLVHAFYCHDSG
ATVLAYAPKHQLLISGGRKGFTCVFDLRHRHQRQLFQSHDSPVKAIAVDPTEEYFVTGSA
EGNIKIWSLSTFSLLHTFINEHARQSIFRNIGTGVMQIETGPANHIFSCGADGTMKMRIL
PDQFSPLNEVLKNDVKFML
NT seq
9060 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctcaccggggccgtgaatcccggcgaccactgcttctccgtg
ggcagcgtcggcgatcagcgcttcacggcttatgcatctggatgtgacattgtaatactg
ggaagtgattttgaaagattacagataattccgggagctaaacatggaaatattcaagtg
ggatgtgtagactgttcaatgcaacaaggcaagattgcagcatcctatggaaatgttatc
tctgttttcgaaccagttaacttaccaaaggaaaagaaaaatttggaatcatatagtcag
tggcagaaaactggccagttttttctggagtcaatagcacacaatataacttgggatccc
acaggcagtcgtcttttaactggttccagctgtttgcagctctggtccaatactttggag
aagccaagtgaaaatgaaaatccagataaaacagatcttaactttggggattggagatgc
atctggcattgcaaaactgcttcccaagtacatttaatgaaattttcaccagatggagaa
ttttttgccactgctgggaaggatgactgtcttttaaaggtgtggtataatgtagaaaac
tggcggacagctgttacttctccagatagaagttcagaaaaacagtcccaaggggaaatt
gacttttcatttgtatatctggcccatcctcgatctgtaaatggattttcctggcgtaag
acgagcaaatatatgccaagggcttctgtgtgtaatgtactgttgacttgctgcaaagat
aatgtatgtcgtctttgggtagagacatttttaccaaatgattgtttgctatatggaggt
gactgcaaccattggactgaaccagttagtttaacaaataacttcaagagaaatgcttcc
agtaaagaacgagttcagagtgctttagaagtaaatctgagacattttcgtagaggtcgg
aggagatcacttgcactggtagcgcataccggatacctgccacatcagcaggatccacat
cacgttcacaggaacactccactgcatgccaatgcactttgccactttcatattgctgcc
agcatcaacccggccacagacattccacttcttccttctattacatcactaagtctcaat
gaagatgaagagaagagtggaccttttgtggtacactggctgaacaataaagagttacat
cttactttgtccatggaagtctttttacagcaactgagaaaaagttttgaacagccgtct
tctgaggccagtgtagaagactgtaatcaggctgatgtaaaatctgatgaagaaacggat
gatggtgttgatgatttgaaaataaatcatggaaagaaggaactgggcagtgataaaatg
gtcccaaactcaagtttgccatcagctgccattgatcatcagattgaagtacttctgtct
gaatggagtaaaaatgcagacatgctgttcagtattcatcccatggatggttctttgctg
gtttggcatgtggattggctggatgaataccagcctggtatgtttcgtcaagtgcaggtg
tcctttgtttccagaattcctgtagcttttcccacaggtgatgcgaactctctttgtaaa
agcatagtgatgtatgcttgtactaagaatgttgacttggctattcagcaaggcaaacaa
aagccttcgagtctcacacattccacatcaatgcttatctcttctagtcacagtaaatca
actaatagtttaaaattaagtattttcaccccgaacgtcatgatgatttcaaagcacgcc
gatggttctctcaatcagtggctggtcagttttgccgaggaatctgctttttcaacagtt
ctcagtatttctcacaaatccagatattgtggtcatcgctttcaccttaatgatttagct
tgccactcagtattaccgttactgctgacgacatcacaccataatgcattaaggacacca
gatgttgataaccaaaagcaaccttacgatggtgtcagtactgaagaatgttctttggga
caacagaatcaaagcaccattgacgtggtatttcaggatcctaatgcagtttatagtgag
cttattctttggagggtcgatccagttgggccattgtctttttctggaggtgtttctgag
cttgcccggatcaattctcttcatgtttctgccttttccaatgtggcatggctgcccact
cttatacccagttactgtctaggtgcatattgcaactctcctagtgcatgctttgtagca
agtgatggacaatatctgagattatatgaagcagttattgatgccaagaaacttttatat
gagctttctaaccctgaaatttctaaatacgttggtgaagtatttaacatcgtaagtcaa
caatcgacagccaggccaggatgtattattgcattagatcccattaccaaacttcatggc
agaaaaacacagctgcttcatgtttttcaagaagatttcatcttgaatagtattgagaag
aaaagtttgggaaaggatagcactgtatctgatgcaggcagctcacctaatagattttct
gaaaaattctacctaattgtaatagagtgcactcaggacaaccggtcattgttacacatg
tggaatttacatttaaagtccattcctgtctctttggatgaaaaaatagatacaaaaata
cctgaagcagtttggcaaccagaagatcattattcttctccagagaatagcccacctgct
ttttcacagaagtatcaggcttgcagagcaaatctccaaagtaccagcaagttgaccctt
tcttcagaaatggtttatagccaagagtttaatttaccagaaggagttgagataataagt
gttaagccatcagcagggcatctgagttcttcttccatatatcctgtatgcagtgctcct
tatttattggcaacttcatgctcagatgagaaagtaagattctggagatgcagagtaaca
ggtgtagaatctgctacatcacagaatggcaaaatggatcttgtatacatttgggaagaa
tggccattacttatcgaagatggacttcagagcaatagtagtataactgtacctggtagg
cctgtagaagttagctgtgcacacacaaatcgtttagcagtagcttataagcagcctgca
tataatagtagatcttctcaggactttatgatgcatgtaagtatttttgaatgtgagtct
acaggaggttcatgttggattctagaacagacaattcatttagatgagttaagcacagtg
ttagattctggcattagtattgatagcaatttagtagcctataataaacaagaggtgtat
ttatccagtaaagagattatcacatcaaacacaaagcacttagttcacttagactggatg
tctagagaagatggttctcatatcctgactgtaggaattggatcaaaactttttatgtat
ggacccctggctggcaaagtacaagaacagactggtaaggaaagcctggcatttccactc
tgggagagtactaaagttgtgcctctttccaagtttgtactgttacgaagtgtagacttg
gtttcttctgtagaaggctccccaccttttcctgtttctttatcatgggttcgtgatggt
atccttgtcgtaggaatggactgtgaaatgcatgtatattcccagtggcagccatcttct
aaacaagaagctgttataacagattcatacaatgggagcactccatctataataagttta
ataaagcagagtaattcatcaagttctggattgcatcctccaaagaaaactctgactcga
tccatgaccagtcttgcacagaaaatctgtggaaagaaaactgcattcgatccttcagtg
gatatggaagattcaggtctttttgaagcagcccatgcgctttccccaactttacctcag
taccatcccttgcagcttttggaactcatggatctcggcaaagttcggagagcaaaggcc
atcttgtctcatcttgtcaagtgcattgctggggaagttgtggctctgaatgaagctgaa
tccaatcatgaacgccgcctcaggtctctcaccatcagtgctagtggaagcactactaga
gacccccaagcattcaacaagagtgaaaatacagattacacagaaatagattctgtccct
ccacttcctttatatgctttacttgcagcagatgatgatagttgttatccagccttggag
aaatctagtaaccagagtaccttgaataaatcaaaccagttgtcaaatgaaagttataat
gagctttttcagatttcagctctaatttctgatagtcatgtgttagaagcagatgaagaa
aatgcaaagcccaggattattgacctttcacagtacagtccaacttactttggtcctgag
catgctcaggttctttctggccacttgcttcattctagcttaccaggactcagccggatg
gagcagatgtctttaatggccttagcagatacaattgcaactacaagcactgatattgga
gaaagcagagacaaaagccaaggtggagaaactcttgatgaatgtggattaaaatttctt
ttggctgttcgactccatacttttcttacaacttctcttccagcctatcgagctcaactc
cttcaccaaggcctgtctactagtcattttgcctgggcatttcattcagtagcagaagaa
gaactgctgaacatgttgccagcaatgcaaaaagatgatcccacttggtctgagctaaga
gctatgggtgtagggtggtgggtccggaatacacgcaacttacgcagatgtatagaaaag
gtagcaaaagccgccttttatagaaagagtgatcctttagatgccgccattttttacctc
gcaatgaaaaagaaagctgtgatttgggggttatatagatctcaaaaggatgccaagatg
acacagttttttggacacaattttgaggatgagaggtggcgtaaagcagctttaaagaat
gctttttcattgctaggcaaacagcgatttgaacattctgcagcattttttcttttagct
ggttgcctcagagatgcaattgaggtatgtcttgagaaactgaatgacattcagttggct
cttgtaatagcaagactctatgagtctgaatttgatacatcttcaacatataagtctata
ttacgtaaaaaagttttgggaattgactctctggtccatgaactcaattcattgaacata
aatatgcattatgatccttttcttcggagtatggcatattggattttggaagattatggt
agtgcgctggaaaccttaataagacaacctatcagagaggatgatggtcaaaccatgatg
tcagcctgtaatcctgcagtttttaatttctacaattatctaaggacacatcctcttttg
ctgagacgtcatattggatcttctgatgtgttttccacgtatatgagtttaacagggaaa
aatggactggcaggaacaattaatttaagtgaaagaagattattttttactactgccagt
gctcatttaaaagctggttgtcccatgttagctttggaagtattgtcaaagatgcccaag
gtcataaaaaagacgaaacctttttgtagaacatctagttttctggatacgagtaaagac
tgttctccttcttcattaaaattggatgccagagacggcaaatcttcttctatcggttgg
tcacagtcagtgatgaatggttttggatcttcttcagagggttcctcagagaaacaatca
aactccactctttctcttgactggagccaaccaagtgttgtatttcaggatgactcttta
gagttaaaatgggacagtgataatgatgaagaaaatgaggatcttcctatttcaatgaaa
gaactaaaacctttacagagaaaaataagtaaaaaattagatgaaacaagttctaattac
acagaatctttgagcacactagatgaaaatgacattttaagtccttcagaagatacaatt
gcagttcagttgaaatttagagcatgtttaaagattctcacagtagaacttcgtacttta
tctactggctatgaaatagatggtggaaaattgcgttaccagctataccactggcttgaa
aaagaagtgatagctcttcagagaacttgtgactattgttcagatgttgaagaattacag
tctgcatttggtgaaactggagatgaatttagattaaatgaagatgctaaagatttgcct
cacgaaactaaagtgaaacaactaagagaaaattttcaggaaagacgacagtggctcttg
aagtatcagtcactcttgaggatgtttcttagttattgcatacttcatggatcccacggt
ggaggtcttgcatcagtgagaatggaattgattttacttttacaagaatctcagcaggaa
acatcagaaccagtttttcctagccctctgtcagagcaaagctcagtacctctactcttt
gcttgtacagccagtgccaaaacagtagttgccaatccattattgcacctgagtaatcta
acacatgatattctgcatgccatagtaaactttgattcgccaccccatcctgatatccaa
aacaataacgtatatgtaatgcatactttagcagcttcactttctgcttgtatttatcag
tgcctttgtggtagtcataactacagttcattacaaacaaatcagtttactggaatggta
tatcagacagtactgcttccccaccgacattctttgaaaacaggaagctcagatgaagca
gtaattcccaacacatcaccagctcaatggccaggaataacttctctaattcaacttttg
aattcttctggtgaggaagcccatccagggctcacagtcttgctctgtgagattctcaca
gcagtttatcttagtctcttcatccatggcctggcaacacattctagtaatgaactattt
cggattgtggcccatcctttaaatgaaaaaatgtggtctgctgtatttggtggaggtgca
catgtttccagcaaagaacagacacattcaaaaggtttgtccgtttcttcattagtggaa
gaaggagaaaaacagaacaaacattttaggtcatcaaaaatgtcttgcagagaatctgct
ccactgacctcttcttcaccaccagtaagccaggagtcactggtagtcaaagagaagttc
atcccacctgagctcagtatctgggactatttcatagccaagccttttctaacagctttg
caaagtagagcagagtatgattcagaggagagtctggaaagtgatgatgacagtgacgat
attttagcttcagatttccatctccaggagcattctaactcaaattcatatagttggtcg
ttgatgcgattggcaatggtgcagttggtgctcaacaatttgaagactttctatcctttt
gcaggccatgatctcgcagagcttccagttagttcaccactttgtcatgcagttctaaaa
actctgcaatgttgggagcaagttcttctccgacgacttgaaatccacggtgggccacct
caaaactatatcgcaagtcacacctctgaagagagtttgtcttcaggtcctgcaattctc
cgccacaaagctttgctggaaccaacaaacactcctttcaaatctaaacatcatctggca
ctttctgtgaagaggctttggcagtacttggtaaagcaggaagaaattcaagagaccttt
atcagaaatatattcacaaagaaacgatgtctaaatgagatagaagcagatttgggatat
cctggaggtaaagcaagaattattcataaggaatctgatatcattactgcttttgctgtt
aataaagcaaatagaaactgcatagcaattgcttccagccatgacgttcaagaactagat
gtttctggaattctagctacgcagatctatacttgggtggatgatgatatagaaatggaa
accaaaggctcagaagatttcttggtcatacatgctcgtgatgatttaacagctgttcaa
ggtacaacaccttatacacatagcaatcctggcactccaatcaacatgccatggcttggt
agtacacagactggcagaggagcatctgtgatgattaaaaaagccattaataatgtcaga
agaatgacttctcatccaactcttccttattatctgacaggagctcaagatggaagtgtc
agaatgtttgaatggggccattctcagcaaataacctgttttcggtctggtggcaattca
agagttacaagaatgagatttaactatcagggaaataagtttggaatagttgatgctgat
ggatatttaagtttgtatcaaacaaattggaaatgttgtacagttactggaagcatacct
aagccatacctgacttggcagtgtcataataaaacagcgaatgattttgtcttcgttagt
tcttcctctctgatagctactgctggtctttcaacggacaatagaaacatatgtttgtgg
gatactctcgttgcacctgccaacagtttagtccacgctttttactgtcatgatagtgga
gccacggttttagcatatgctccaaaacatcagctactgatatcaggtggcagaaaaggc
tttacatgtgtatttgaccttcgccaccgacaccagaggcagcttttccagagccatgac
tctccagttaaagccattgctgtcgatccaactgaagagtactttgttacaggatctgct
gaagggaatataaagatttggagtctctctacttttagtcttctgcacacttttatcaat
gaacatgctcgacagtccattttcaggaatattggaactggagtgatgcagattgaaaca
ggacccgcaaatcacattttctcttgtggagctgatggaacaatgaaaatgagaatactg
ccagatcagtttagcccattgaatgaagtgttgaaaaatgatgtgaaatttatgctgtaa
DBGET
integrated database retrieval system
