Trichechus manatus latirostris (Florida manatee): 101357114
Help
Entry
101357114 CDS
T05135
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101357114
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101357114
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
U-box type E3
101357114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101357114
NCBI-ProteinID:
XP_004373401
UniProt:
A0A2Y9DFX5
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSSHPPPSISSLASNQSSLAPPVPGNSSSTPAPVPDITATVSISV
HSEKSDGPFRDSDNKILPAAALASEHSKGTSSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPAAPVFVPVPPPPLYPPPPHTLPLPSGVPPPQFSPQFPPGQPPPAGYSVP
PPGFPPAPANLSTSWVSSGVQTVHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDE
FTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFS
RSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQS
PTKRNVPQGETEREYFNRYREVPPPYDVKAYYGRSVDFRDPFEKERYREWERKYREWYEK
YYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREDYAAAGQSHRSRNIGGNYPEKL
PARDSHNQKDNTKTKEKESENAPGDGKGNKHKKHRKRRKGEENECFLNPELLETSRKSRE
PTGGEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKRK
NDGSTVSKKENVKPAKGPQEKVDGEREKSPRSEPPLKKAKEETPKTDNANKSTSSSQKDE
KIIGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTNKEEKAKKPTEKSKPLDS
KGEKRKRKTEEKGVDKDFESSSLKISKLEVTEIVKPSPKRKMEPDIEKMDRTPEKDKNSS
TAPAKKIKLNRETGKKIASAENISNTKELSEKLESTSSKVKQEKVKGKVRRKVTGTEGSS
STLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWD
KDDFESEEEDVKSTQPISNVGKPASVIKNVSTKPSNTVKYNEKESEPSDKVQKLTKEVSH
EIVTHEVKSSKNSTSSEKGKTKDRDHSVLEKENPEKRKSSTQPEKDSNLDRLSEQGSFRS
LSQSSKETRTSDKHDSVRGSSNKDFTPSRDKKPDYDNRDYSSSKRRDERNESTRRKDSPP
RNKDSASGQKNKPRDERDLAKKGTGDSKKSNLSPSRDRKPHDHKATYDTKRSSEETKSVD
KNPCKEREKHISEARNSKESSVNKLLYILNPPDSQTEKEQVTGQIDKNAVKPKPQLSHSS
RLSSDLTRETDEAAFEPDYNESDSESNVSVKEEETSGKISKEMKDKVIEKVKENLDAAAV
GQIGITRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHK
KHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEKDDQKVKSVTV
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcttctaaactcaactatgataccgtcacctttgat
gggctacacatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgatctgcagatcaccaacgcgcaaactaaagaagaatatactgatgat
aatgcactaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccgatcaattacatgaagaaacctctaggtccaccacctccatcttacacc
tgtttccgctgtggtaaacctggccattatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctagaattaaaaagagcactggaattcctagaagttttatgatg
gaagtaaaagatcctaacatgaaaggtgcaatgcttaccaacactggcaaatatgcaata
ccaactatagatgcagaagcatatgcaattgggaagaaagaaaaaccaccctttttacca
gaagaaccatcctcttcttcagaagaagatgatcctatcccagatgaattgttgtgtctc
atttgcaaagatattatgactgatgcagttgtcattccctgctgtggaaacagttattgt
gatgaatgtataagaacagcactcctggaatcagatgaacatacgtgtccaacatgtcat
cagaatgatgtctctcctgatgctttaatagccaataaatttttacgacaggctgttaat
aacttcaaaaatgagactggttatacaaaaagactacgaaaacagttgcctccaccacca
cccccaataccacctccaagaccacttattcagcggaacctccagcctctgatgagatct
ccaatatcaagacagcaggatcctctgatgattccggtgacatcttcgtcatctcaccca
cctccctctatatcctcactggcttctaatcagtcttccttggctcctcctgtgcctgga
aattcatcttcgacaccagctcctgtacctgatataactgcaacagtgtccatatcagtc
cattcagaaaagtcagatggacctttccgggactctgataataaaatcttgccagctgca
gcccttgcatcagaacattcaaagggaacctcctcaattgcaattactgctcttatggaa
gagaagggttaccaggtgcctgtacttggaaccccatctttgcttggacagtcattattg
catggacaattgatccccacaactggtccagtaagaataaatactgctcgtccaggtggg
ggtcgaccaggttgggaacattccaacaagcttggatatctggtttctccaccacagcaa
attagaaggggggagaggagctgctacagaagtataaaccgtggacgacaccacagcgag
cgatcacagaggactcaaggcccatcactaccagcagctccagtttttgtgcctgtccca
ccacctcctttgtatccacctcctccccatacacttcctctcccttcaggtgttcctcca
ccacagttttctcctcagtttcctcctggccagccaccacctgctgggtatagtgtccct
cctccagggtttcctccagctcctgccaatttatcaacatcttgggtatcatcaggagtg
cagacagttcattcaaataccatcccaacaacacaagcaccacctttgtccagggaagaa
ttctatagagagcaacgacgactaaaagaagaggaaaagaaaaagtccaagctagatgag
tttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtagg
cgctcattttccaggtctaaatctccctatagtggttcatcatattcaagaagttcatat
acttattctaaatcaagatctggttcaacacgttcacgctcttattctcgatcatttagc
cgctctcactctcgttcctattcacgatcacctccatatcccagaagaggcagaggcaag
agtcgaaattaccgttcacggtctagatctcatggatatcatcgatctcggtcaagatca
cctccatatagacgctatcattcacgatcaagatctcctcaagcgtttaggggacagtct
cccactaaacgtaatgtacctcaaggggaaacagaacgtgaatattttaatagatacaga
gaagttccaccaccttatgatgtgaaagcatattatgggaggagtgttgactttagagac
ccatttgaaaaggaacgttacagagaatgggagagaaaatacagagagtggtatgaaaag
tactatgctgctggagcacagcctagaccctcagcaaatagagagaacttttctccagag
agatttttaccacttaatatcaggaattctccctttacaagaggccgcagagaagattat
gctgctgctggacaaagtcatagaagtcgaaacataggtggcaactatccagaaaagctt
ccagcaagagacagtcacaatcagaaggataatacaaaaacaaaagagaaggagagtgaa
aatgctccaggagatggtaaaggaaataaacataagaaacatagaaaaagaagaaaagga
gaagaaaatgaatgttttctgaacccagagttactagagacatctaggaaatctagagaa
cctacaggtggtgaggaaaataaaacagactcattgtttgttctcccaagtagagatgat
gctacacctgttagagatgaaccaatggatgcagaatccatcacttttaaatcagtgtct
gaaaaagacaagagagaaaaggacaagccaaaagcaaaaggtgacaagaccaaacggaaa
aatgacggatctactgtgtccaaaaaagaaaatgtaaaacctgctaaaggacctcaagaa
aaagtagatggagagcgtgaaaaatctcctcgatctgaaccaccacttaaaaaagccaaa
gaggagactccaaagactgacaatgctaataaatcaacatcttcctctcagaaagatgaa
aagatcattggtacccccaggaaagctcactccaagtcagcaaaagaacaccaagagaca
aaaccagtcaaagaggaaaaagtgaagaaggactattccaaagatgtcaaatcagaaaag
ctaactaataaggaagaaaaggccaagaagcctactgagaaaagtaagccacttgatagc
aagggagaaaaaagaaaaagaaaaactgaagaaaaaggtgtagataaagactttgagtca
tcttcattgaaaatctctaaactagaagtaactgaaatagtgaaaccatcaccaaaacgc
aaaatggaacctgatattgagaagatggatagaacccctgaaaaggacaaaaattcatca
actgccccggccaaaaaaataaagctcaacagagaaacagggaaaaaaattgcaagtgca
gaaaatatatctaatacaaaagaactctctgaaaaattggaatcaacatctagcaaagtt
aaacaggaaaaagtcaaaggaaaagtcagacgaaaagtaactggcactgaaggatccagc
tcaactcttgtggattataccagtaccagctcaactggaggcagtcctgtgcggaaatct
gaagaaaaaacggatacaaagcgaactgtcattaaaactatggaagagtataataatgac
aatacagctcctgccgaagatgttattattatgattcaggttcctcagtccaaatgggat
aaagatgactttgaatctgaagaagaagatgttaaatctacacagcctatatcaaatgta
ggaaagcctgctagtgttataaaaaatgttagcactaagccatcaaatacagtcaagtat
aatgaaaaagaaagtgagccatcagacaaagttcagaaactcaccaaggaagtgagccat
gaaatagtaacgcatgaggttaaaagttcaaaaaactccacatctagtgaaaaagggaaa
accaaagatcgcgatcattcagtgttggaaaaggaaaaccctgaaaagaggaagagcagc
actcaaccagagaaagatagtaatttggaccgtctcagtgaacaaggaagttttagaagt
ctgtctcaatcttccaaagagactagaacttcagataagcatgattccgttcgaggttcc
tcaaataaagactttactcccagtagagacaaaaaacccgactatgacaacagagattat
tcaagttccaaacgtagagatgaaaggaatgagtcaacaagaagaaaagactctcctcct
cggaataaagattctgcatctggacagaaaaataaaccaagagatgagagagatttggct
aagaagggaacaggagattccaaaaaaagtaatttaagtccctcaagagacagaaaacct
catgatcacaaagccacttatgatactaaacgctcaagtgaagagacaaaatctgtagat
aaaaatccttgtaaagagcgtgagaagcatatatcagaagcacggaacagtaaagagtca
agtgtcaataaattactctatatacttaacccaccagactcacagactgaaaaagagcaa
gttactgggcaaattgacaagaatgctgtcaaacctaaaccccagttaagccactcctct
cgactttcctctgacttaactagagaaactgatgaggctgcttttgaaccagactataac
gaaagtgacagtgaaagtaatgtatctgtaaaagaagaggaaacgtcaggaaagatttct
aaggaaatgaaagataaagtgatagagaaagtaaaagagaacctggacgcagcagcagtt
ggccaaataggcataaccaggagtcagagtcaaagcagccctagtgttagtccgagtaga
agtcatagcccttctggaagccaaacccgaagccacagtagcagtgccagctcagcagaa
agtcaggacagcaagaagaagaagaaaaagaaggaaaagaaaaagcacaagaaacataaa
aaacataagaagcataagaagcatgcaggcactgaagtagaattggaaaaaagccaaaaa
cacaaacacaagaaaaagaagtcaaagaagaacaaagataaagaaaaggagaaggagaaa
gatgaccaaaaagtgaaatctgtcactgtgtaa
DBGET
integrated database retrieval system
