Trichechus manatus latirostris (Florida manatee): 101357354
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Entry
101357354 CDS
T05135
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04137
Mitophagy - animal
tmu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101357354
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101357354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101357354
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
101357354
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101357354
Multi subunit type E3
ERAD complex
101357354
LMBR1L-GP78-UBAC2 complex
101357354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
SVIP
Motif
Other DBs
NCBI-GeneID:
101357354
NCBI-ProteinID:
XP_004371629
UniProt:
A0A2Y9DCN5
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALTQPEPEAGPGPGESEQPVPVRADA
RSPRTRDVAQYLLSDSLSVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNF
IFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGR
VLSLLIAMLLSCCGLAVVCCITGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLN
HEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEV
QRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCL
RSWLEQDTSCPTCRMSLNIADNSRVREDHQGENLDENLVPVAAAEGRPRLNQHNHFFHFD
GSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRS
VEITTDNVLEGRIQVPFPTQRSDSIRPALNSPVERPNSDQEEGEASTQTERVPLDLSPRL
EEALDFSEVEVEPSEVEDFEARGSRFSKSADERQRMLVQRKDDLLQQARKRFLNKSSEHD
SASESYLPSEGTSSDPVTLRRRMLAAAAERRLQKQQTS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctcgagcgttttccctggccaagcctccgtacctacacgggcctc
agcggcctggccctgctcggcaccatcgttagcgcctaccgcgccctcacccagcccgag
cccgaggctgggcctgggcccggcgagtcggagcagcccgttcccgtccgggcggacgcc
aggagtccccggacccgcgacgtggcccagtacctgctttcggacagcctctccgtgtgg
gtcctggtaaatactgcttgctgtgttttgatgctggtggctaagctaatccagtgtatt
gtgtttggtcctcttcgagtgagcgagaggcagcacctcaaagacaagttttggaatttt
attttctacaagttcattttcatttttggtgtgctgaacgtccagacagtggaagaggtg
gtcatgtggtgcctttggtttgctgggcttgtatttctgcatctgatggttcaactctgc
aaggaccgatttgaatatctttccttctctcccaccacaccgatgagcagccatggtcga
gtcctgtctctgttgattgctatgctgctttcctgctgtggattagcagttgtctgttgc
atcacaggctacactcatgggatgcacacgttagctttcatggctgcagagtctcttctt
gtgacagtgaggactgctcatgtgattttacgatatgtaattcacctctgggacctcaac
catgaagggacatgggaaggaaagggaacatatgtctattacacagatttcgtcatggaa
cttactctcttgtccctggacctcatgcaccatattcacatgttgttatttggcaacatc
tggttgtccatggccagcctggtgatctttatgcagctgcgctatctgtttcacgaggta
cagcgtcgaatccgtcggcacaagaactatttgcgtgtggttggaaacatggaagccagg
tttgcagttgcaactccagaggagctggctgtcaataacgacgactgtgcaatctgctgg
gactccatgcaggccgcaaggaaactgccctgtggacatcttttccataactcctgtctt
cgttcctggctggaacaagatacctcctgcccaacatgcagaatgtctcttaatattgct
gacaacagtcgtgtcagggaagaccatcaaggagagaacttggatgagaacctggttccc
gtggcagccgctgaaggtcgacctcgcttaaaccaacacaatcacttcttccactttgat
gggtcccggattgcaagttggctgccgagtttttccgtcgaagtgatgcacaccaccaac
attcttggcattactcaggcaagcaactcccagcttaatgcaatggctcatcagattcaa
gaaatgtttccccaggttccataccacctggtgctgcaggacctccagctgacacgctca
gtcgaaataacaacagacaacgttttagaaggacgaattcaagtaccttttcccacacag
cggtcagatagcattagacctgcattgaacagtcctgtggaaaggccaaacagtgaccag
gaggagggagaagcttctactcagactgagcgcgtgccgctggatctcagtcctcggctg
gaggaggcattggacttcagcgaggtagaagtggagcccagtgaggtagaagactttgag
gctcgggggagccgcttctccaagtctgccgacgagagacagcgcatgctagtccaacgc
aaggatgacctcctgcagcaagctcggaagcgtttcttaaacaaaagttctgaacatgac
tcagcctcagagagctacctcccctcggaaggcacgtcctctgaccctgtgacgctccgt
cgaaggatgttggctgctgctgccgaacggagacttcagaagcagcagacctcctag
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