Trichechus manatus latirostris (Florida manatee): 101357390
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Entry
101357390 CDS
T05135
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101357390
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101357390
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101357390
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101357390
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101357390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
101357390
NCBI-ProteinID:
XP_004381182
UniProt:
A0A2Y9DUB9
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MRPEPAGAGARNAAPAGAVQSRSPGRGRRRLIGSRAGGQRCPEAALLTLEPARMGPPRPS
PGPGGQRWPLPPMLLALLLLLAPSPGHATRVVYKVPEEQPPNTLIGSLAADYGFPDVGHL
YKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLSGEPCILEFEVSITDLVQNGSP
RLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYELQA
GPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERRDSYDLTIKVQDGGSPPRASSALLRVT
VLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRL
LRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGANPKSARAQVVVTVKDMNDNAPTIEI
RGIGLVTHQDGVANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETG
SDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQS
ITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAARGLFTISPETGEIRVKTS
LDREQRDSYELKVVAADRGSPSLQGTATVLINVLDCNDNDPKFMLSGYNFSVMENMPALS
PVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVD
GGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHQLLIPQTRLGETVSQVTAEDIDSGVN
AELTYSIAGGNPYGLFQIGSRSGAITLEKEIERRHYGLHRLVVKVSDRGKPPRYGTALVH
LYVNETLANRTLLETLLGHSLDTPLDIDIAGDPEYERSKQRSNILYGVVAGVVAVALLIA
LAVLLRYCRQREAKSGYQAGKKETKDLYAPKPSSKASKGNKSKGKKSKSPKPMKPVEDDD
EAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASK
KHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTFSATSQAQE
LQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEMEHPENDLR
PLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRGGQEPAGT
GSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPSAATPASTQ
TVKREIYL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccagagccagctggagccggagcccgaaacgcagcgcctgctggagcggtacag
agccgcagcccgggccggggccggcggaggctcatcggcagcagggccggcggccagcgc
tgcccggaggcggccctcctaactctggagcctgccaggatggggcccccgaggcccagc
ccaggccctggggggcaacggtggccactgccccctatgctgctggcactgctgctcctg
ctggccccatccccaggccacgccactcgagtagtgtacaaggtgccagaggagcagcca
cccaacaccctcattgggagcctcgcggctgactacggttttccagatgtaggccacctg
tacaaattagaggtaggcgccccatacctgcgagtagatggcaagacgggtgacatcttc
accaccgagacctccattgaccgtgaggggctccgtgagtgccaaaaccagctctctggt
gagccctgcatcctggagttcgaggtgtctatcacggacctcgtgcagaatggcagcccc
aggctgctagagggccagatcgaggtgcaggacatcaatgacaacacgcccaacttcgcc
tcacctgtcatcacgctggccatcccagagaacaccaacattggctcgctcttccccatc
ccactagcctcagaccgtgatgctggccccaatggtgtggcatcctatgagctgcaggcc
gggcctgaagcccaggagctgtttgggctgcaggtagcagaggaccaggaggagaagcag
ccgcagctcattgtgatgggcaacctggaccgtgagcgccgggactcctatgacctcacc
atcaaggtgcaggatggtggcagccccccccgcgccagcagtgccctgctgcgtgtcact
gtgctcgacaccaatgacaacgctcccaagttcgagcggccctcctatgaggctgagctg
tctgagaatagccccataggccactcggttatccaggtgaaggccaatgactcagaccaa
ggtgccaatgcagagatcgactacacgttccaccaggcgcctgaagtggtgaggcgtctt
ttgcgactagacaggaacactggacttattactgtacagggccctgtggaccgtgaggac
ctaagcaccctgcgcttctcggtccttgccaaggaccgaggtgccaaccctaagagtgcc
cgtgcccaggtggttgtgactgtgaaggacatgaatgacaatgcccccaccattgagatc
cggggcatagggctagtgacccatcaagatggggttgctaacatctcagaggacgtggca
gaggagactgcggtggccctggtgcaggtgtctgaccgagatgaaggagaaaatgcagct
gtcacctgtgtggtggcaggtgatgtgccctttcagctacgccaggccagtgagacaggc
agtgacagcaagaagaagtacttcctgcagaccaccaccccactcgattatgaaaaggtc
aaagactacaccatagagattgtggccgtggactctggcaaccccccactctccagcact
aattccctcaaggtgcaggtggtggatgtcaatgacaatgcacctgtcttcacccagagc
atcactgaggtcgccttcccagaaaacaacaaacctggtgaagtggtcgctgaggtcact
gccagtgatgctgactctggctccaatgccgagctggtctactctctggagcctgaacct
gctgccaggggcctctttaccatctcacctgagactggagagatccgggtgaagacatcc
ctcgatcgggaacagcgggacagctacgagttgaaggtggtggcagctgaccggggcagc
cccagcctccagggcacagccaccgtcctcatcaatgtgctggactgcaatgacaatgac
cctaaatttatgctgagtggctacaacttctcagtgatggagaacatgccagcactgagt
ccagtgggcatggtgactgtcattgatggggacaaaggggagaatgctcgggtgcagctc
tcggtggagcaggacaatggcgactttgttatccagaatggcacgggcaccatcctctcc
agcctgagcttcgatcgggagcagcaaagcacctacaccttccagctgaaggcggtagat
ggtggtgtcccacctcgctcagcttatgttggtgtcaccatcaatgtgctggacgagaat
gacaatgcaccctttatcactgccccatccaacacctcccaccagctactgatcccccag
acacgtcttggtgagacggtcagccaggtgacagccgaggacattgactccggtgtcaat
gctgagctgacctacagcatcgcgggtggcaacccttacggactctttcagattgggtcc
cgttcgggtgccatcaccctggaaaaggagattgagcggcgccactatgggctgcaccgc
ctggtggtgaaggtcagcgaccgtggcaagcccccacgctatggtacagccctggtccac
ctttatgtcaatgagaccctggccaaccgcacattgctggagaccctgctgggccacagc
ctggacacgcctctggatattgacattgctggagatccagagtacgaacgctccaagcag
cgaagcaacatcctctatggcgtggtggctggcgtcgtggccgtggccttactcatcgct
ctggcagtgctcctgcgctactgccggcagcgggaggccaagagcggctaccaggctggt
aagaaggagaccaaggacttgtatgctcccaaacccagcagcaaagcctccaaaggaaac
aaaagcaaaggcaagaagagcaagtccccaaagcccatgaagccagtggaggatgacgat
gaggccgggctgcagaagtccctcaagttcaacctgatgagtgatgcccctggggacagc
ccccgcatccacctgcccctcaactacccaccaggcagccccgacctgggccgccactac
cgctctaattccccattaccttccatccagctgcagccccagtcaccctcggcctccaag
aagcaccaggtggtgcaggacctgccacctgccaacacgtttgtgggcactggggacacc
acgtccacaggctccgagcagtactccgactacagctaccgcaccaacccccccaaatac
cccagcaagcagttacctcaccgtcgcgtcaccttctcggccaccagccaggcccaggag
ctgcaggacccgtcccagcacagttactacgatagtggcctggaggagtctgagacgcca
tccagcaagtcatcctcggggccccgactcggtcccctagccctgcctgaggatcactat
gagcgcactactcctgatggcagcataggcgagatggaacacccagagaatgacctgcgc
cctttgcctgatgtcgccatgacgggcacatgtacccgggagtgcagcgagtttggccac
tccgacacgtgctggatgcccggccagtcatctcccagccgccggaccaagagcagcgcc
ctcaaactctccaccttcgtgccttaccaggaccggggagggcaggagcctgcgggcacc
ggcagccccagccccccggaagaccggaacaccaaaacggcccccgttcgcctcctgccc
tcctacagtgccttctcccacagtagccatgattcctgcaaggactcggccaccttggag
gaaatccccctgacccaaacctcggacttcccatccgcagccacaccggcatccacccag
acggtcaagcgtgagatctacctgtga
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integrated database retrieval system
