Trichechus manatus latirostris (Florida manatee): 101357549
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Entry
101357549 CDS
T05135
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101357549
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101357549
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101357549
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101357549
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101357549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
KIAA1549
LYRIC
MLANA
Fibulin_C
Adeno_E3_CR2
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
101357549
NCBI-ProteinID:
XP_004375175
UniProt:
A0A2Y9DJ25
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
MLRMRTAGWARGWCLGCCLLLRLSLSLASAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGEGRRSGPADSAPYPGGGGNGASGGGQGSSKRRLDAPEGGGGASPGGRSS
VFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVN
DNSPRFEKNVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDE
TSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKIGR
IPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQNK
KKYFLHTSAPLDYETTPEFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPVFEHSVVEV
YFFENNIPGDRVATVKATDADSGKNAEIAYSLDSSVMGIFAIDPSSGDVLVNTVLDREQT
DRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVT
VVDADKGKNAEMRLYIEENGNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPR
SATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTIVATVLATDSDDGINADLNYS
IVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTALVHVFVNES
VSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMAR
YCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPNGQ
RYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTTGKKHQAVQ
DLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGSLQSC
YDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVALTG
KCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDRNR
NLLNKKLTSSFETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggacggcgggatgggcgcgcggctggtgcctgggctgctgcctcctc
ctgcggctctcgctcagcctggcgtccgccaagcaactcctccggtaccggctggccgag
gagggccccgccgacgtccgcatcggcaacgtcgcctcagacttaggcatcgtgacgggc
tcgggcgaggtgactttcagcctcgagtcgggctccgagtacctgaagatcgacaacctc
accggcgagctgagtacgagcgagcggcgcatcgaccgcgagaagctgccccagtgtcag
atgatcttcgacgagaatgagtgcttcctggacttcgaggtgtcggtgatcgggccctca
cagagctgggtggacctgttcgaaggccgggtcatcgtgctcgacatcaacgataacacg
cccaccttcccgtcgcctgtgctcacgctcacggtggaggagaaccggccggtgggcacg
ctgtacctgctgcctaccgccaccgaccgtgacttcggccgcaacggcatcgagcgctac
gagctgctccaggagcccgggggcggcggcggcgagggccgtcgctctggaccggccgac
agcgccccctaccccgggggcggcgggaacggcgcgagcggcggcggccagggaagctcc
aagcggcggctggacgcgcctgagggcggtggcggggcgagccccggaggccgcagcagc
gtgttcgagctgcaggtggccgacaccccggacggcgagaagcagccgcagctgatcgtg
aagggggctctggaccgggagcagcgcgactcctacgagctaaccctgagggtgcgcgat
ggcggcgacccgccgcgctcgtcgcaggccattctgcgggtgctcattaccgacgtgaac
gacaacagccctcgctttgagaagaacgtgtacgaggctgatctggcggagaacagcgcc
ccggggacccccatcctgcagctgcgcgccgccgacctggacgtgggggtcaacgggcag
atcgagtacgtgttcggagcggccaccgagtccgtgcggcggctgctgcgcctcgacgag
acgtcgggctggctcagcgtactgcaccgaatcgaccgcgaggaggtgaaccagttgcgc
ttcactgttatggcccgcgaccgcggacagccccccaagaccgacaaggccacagtagtc
ctcaacatcaaggacgagaatgacaacgtgccttccattgaaattcgcaagatcgggcgc
attccactcaaggacggtgtggctaacgtggccgaggacgtcctggtcgacacccctatc
gctctggtgcaggtatccgaccgagaccaaggtgagaacggggtggttacctgcaccgtg
gtgggcgatgtgcccttccagctcaagccggccagcgatactgagggcgaccagaacaag
aaaaagtacttcctgcacacctccgctcctctggactatgagaccaccccggagttcaac
gtggtaatagtggcagttgactcgggcagtcccagcctctccagcaacaactctctggtg
gtcaaggtgggagacacaaacgacaacccgcccgtcttcgagcattccgtggtggaggtt
tacttctttgagaacaacatcccgggcgatagggtggccacggtgaaagctacagacgca
gacagcgggaagaacgcagagatcgcctactcgctggactcatccgtgatgggtatcttt
gccatcgatcccagttctggggacgtcctcgtaaatacggtgctggaccgcgagcagact
gacaggtatgagtttaaagttaacgccaaagacaaaggcatcccggtgctccagggcagc
accacggtaattgtgcaggtggctgacaagaatgacaatgaccctaagtttatgcaggac
gtctttaccttttatgtgaaagaaaacttgcagcccaacagcccggtggggatggtcacc
gtggtggatgctgacaaggggaaaaatgcagagatgagactgtacatagaggagaacggt
aatattttttccattgaaaatgacactgggaccatttactccacaatgtcttttgaccgt
gaacatcagaccacctacactttcagagtcaaagctgtggatgggggagatcctcccaga
tctgccacagccacagtatctctctttgtaatggatgagaatgacaatgctcccacagtt
accctccccagaaacatttcctacactttactgccaccttcaagtaatgtcaggactata
gtagctacagtgttggcaacagacagtgatgatggcatcaatgcagaccttaactacagc
attgtgggagggaatcccttcaagctgtttgagattgattccaccagtggtgtggtttcc
ttagtggggaaactcacccaaaagcattatggcttgcacagattggtggtgcaagtgaat
gacagtgggcagccttcccagtccaccaccgccctggtgcacgtgtttgtcaatgaaagt
gtttctaatgcaactgtgattgactcccagatagccagaagtttgcacaccccactcacc
caggatatagctggtgacccaagctatgaaattagcaaacagagactcagtattgtcatt
ggagtggttgctggaattatgacagtgattctgatcatcttaattgtaatgatggcaagg
tactgcaggtccaaaaataaaaatggctatgaagccggcaaaaaagaccatgaagacttt
tttacaccccaacagcatgacaaatcgaaaaagcctaaaaaagacaagaaaaataaaaaa
tctaagcagccactctatagcagcattgtcactgtagaagcttctaaaccaaatggacag
agatatgatagtgtcaatgagaagctgtcagacagccctagcatggggcgataccgatct
gttaatggtgggcctggcagtcctgacctggcaaggcattacaaatccagttccccattg
cctactgtccagcttcatccccaatcaccaactacaggaaaaaaacaccaggccgtacaa
gatctaccaccagccaacacatttgtgggagcaggagacaacatttcaattggatcagat
cactgctctgagtacagctgtcaaaccaataacaagtacagcaaacagccatttcgtaga
gtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactgcagagttgc
tatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcagggccaaga
ctgggtgcccttccactcccagaggacaactatgaaaggaccacgccggatggcagtgtt
ggtgaggcagagcatatggaaaatgattcaagacctcttccagatgtagccctcactggg
aagtgcacccgcgagtgtgatgaatatggccactcagactcctgctggatgcccgtccgc
acttctccagagaggaagaagagccagcccaaactctccactttcatgcctgttgatgaa
cgaggaagtcaggaaaagctggcgaacggcgaggccgccatcatgggtgaccgcaacaga
aacctcctgaacaaaaagttgacctcatcctttgagaccttcagtgcagctagtttcagc
aaaaatgaggaagccaaccctgaggatattccccttacaaaaacaggggaatacaagcca
tctcctgtcaatacactcactagaagagaagtgtacctgtag
DBGET
integrated database retrieval system
