Trichechus manatus latirostris (Florida manatee): 101357848
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Entry
101357848 CDS
T05135
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X3
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101357848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101357848
Enzymes [BR:
tmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101357848
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101357848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
SVA
Motif
Other DBs
NCBI-GeneID:
101357848
NCBI-ProteinID:
XP_004388914
UniProt:
A0A2Y9E851
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MEPVGRWRNLPSGPSLKHLTDPSYGIPREQQKPALQELTRAHVESFNYAVREGLSLAVQA
IPPFEFAFKDERISLTIVDAVISSPTVPKGSICKELKVYPAECRGRKSTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSKVCNLHSLPPKALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKSRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALRALVSFSDYQIFQELIRGKEDDSFFRNSVSQMLRMVTEEGCSTQKQV
LNYLGECFRVKLSLPEWCPSEQAAEFLFDQCICIHLNSNIEKFYVLCLMTRKLFALAKGE
CMEENPDSLMNQEVLTPGQLFLMFLKEKIEAWLVSIKIAIDKKAQKTSVSINTENLMKIF
NLGTDLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTTSIPALLCNLGVT
PVDGAPHRLHSECYPVLLDGVMVGWVEKELAPGIADSLRHFKVLREKRIPPWMEVVLIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGREELIGTMEQIFMNIAIFEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPVGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYGDPYYSYLNLNTGESFLVY
YRSKENCVVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGLELKADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNLQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCVLCNRSDTIDTVSVPYVFRYFVAELAAMNIRVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgtgggccggtggcggaaccttcctagcgggcctagcctaaagcacttgacc
gacccctcttacgggatcccgcgggaacagcaaaagccagcgttgcaggagctgacgcgg
gcacatgttgagtctttcaactacgcggtgcgagaaggactcagcctcgcagtgcaggct
atacctccctttgaatttgcttttaaagatgagcgtatctctcttaccattgtggatgct
gtcatcagctcacccacagttcccaaagggagcatctgcaaagagctcaaagtttaccca
gcagaatgccggggccggaagagtacttaccggggaaagctgacagctgatatcagctgg
gcagtgaatggaatctcaaaaggaatcattaaacagtttcttggctatgttcctatcatg
gtgaagtccaaggtttgcaacttacacagccttcctcccaaagccctcattgagcaccat
gaggaagcagaggaaatgggaggctattttataatcaatggcattgaaaaagtcatccga
atgttgattatgcctcggagaaatttccccattgcaatgataagaccaaaatggaaaagt
agagggcctggctatactcagtatggagtttcaatgcactgtgtgagggaagagcactcc
gctgtcaatatgaaccttcactacttggaaaatggcacagttatgttgaactttatttac
cggaaagaactgtttttccttcctttgggatttgcacttagggcacttgtcagtttttct
gattatcagatttttcaggagctcatcagaggaaaagaagatgactctttctttaggaac
tccgtttcccagatgttaaggatggtaacagaagaaggctgttccacacaaaagcaggtc
cttaactatctaggtgaatgcttcagagtaaagctcagtctccctgaatggtgccccagt
gaacaagcggcagagtttctatttgaccagtgcatctgtatccacttgaattccaacatt
gaaaagttttatgtgctttgtctcatgacccggaaactctttgctttagccaaaggagag
tgcatggaggagaatcctgatagtttaatgaatcaagaagttcttacacctggtcagctc
ttccttatgtttctaaaggaaaaaatagaagcttggttagtgtctattaaaatagctata
gacaagaaggctcagaagactagtgtatccataaacactgaaaatttgatgaagattttt
aatctgggaacagaccttacaagaccattcgaatatcttcttgctactgggaatctgcgt
tctaaaacaggtctcggcttcctgcaagattctggactgtgtgttgtggctgacaagctg
aacttcatacgctatctttcccatttccgctgtgtgcacagaggggctgattttgccaag
atgaggaccaccacagtacgcaggctgcttccagagtcctggggtttcctttgtcccgtg
cacaccccagatggggaaccctgtggtctgatgaaccacttaactgctgtgtgtgaggtt
gtcacacagtttgtgtatacaacatctattccggctttgctctgcaatttgggggtcact
ccagttgatggagctccacatcgactgcacagtgaatgttaccctgtcctgttggatggt
gtcatggttggctgggtggaaaaggagcttgctcctggcattgcagattctctccggcat
tttaaggtgctgagagaaaaaagaattcctccctggatggaggtggtccttatacccatg
acaggaaaacccagtctttacccaggactatttctttttaccactccttgtagactggta
cggcctgttcagaacttggaattaggcagagaagaactaattggaacgatggaacagata
ttcatgaacattgctatctttgaggatgaggtttttgctggagttaccacacaccaggag
ctcttccctcacagcctgttgagtgtgatcgccaacttcatccctttctctgatcacaac
cagagtccccggaacatgtaccagtgccagatgggtaagcaaactatgggctttccgctt
cttacttatcaagaccgatcagataataaactgtatcgtcttcagactccacagagtcct
ttagtgagaccgtacatgtatgattactatgacatggataactatccagttgggacaaat
gccatcgttgctgttatttcatacactggctatgatatggaagatgccatgattgtgaat
aaggcctcttgggaacgaggctttgcccatggaagtgtatacaagtctgagttcatagat
ctttctgaaaaaattaaacaaggagatgatagtctggtgtttggagtcaaacctggtgat
ccacgaattttgcagaaattagatgatgatggattgccatttattggagcacaactgcag
tatggagacccgtattacagctacctaaacctcaatactggggaaagctttctggtctac
tataggagtaaagaaaattgtgttgtagataacatcaaagtatgtagtaatgacactgga
agtggaaaattcaagtgtgtctgcatcaccatgagagtccctcgaaatccaactattgga
gataaattcgccagtcgacatgggcaaaagggcattttgagcaggttgtggccagttgag
gacatgccttttactgagagtgggatggtcccagacattctgttcaatcctcatggtttt
ccatcccgcatgaccattggcatgttaattgagagtatggcagggaagtctgcagctttg
cacggtctctgccatgatgccacacccttcatcttttcagaggagaactctgccttagaa
tactttggtgagatgttaaaggctgctggctacaacttctatggcaccgagagattatat
agtggcatcagtgggctagaactgaaagcagacattttcataggtgtggtttattatcaa
cgcctacgccacatggtctccgacaagtttcaagttagaaccacaggagccagagacaaa
gtcactaaccagcctattgggggaagaaacctccagggtggaatccgttttggggagatg
gagcgagatgctcttttagcccacggtacatcttttctccttcatgaccgcctcttcaac
tgctctgaccgttcagtagcgcacgtgtgcgtcaagtgtggtagtttactctcgccactg
ctggagaagccacccccttcctggtctgccatgcgcaacagaaagtacaactgtgtactt
tgtaatcgcagtgacactatcgacactgtttctgtgccttacgtttttcggtattttgta
gcagaactggcagcaatgaacatcagagtgaaactggatgttgtttaa
DBGET
integrated database retrieval system
