KEGG   Trichechus manatus latirostris (Florida manatee): 101358268
Entry
101358268         CDS       T05135                                 
Name
(RefSeq) WD repeat-containing protein 61 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101358268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmu03019]
    101358268
Messenger RNA biogenesis [BR:tmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     101358268
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR19_1st eIF2A Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 Tricorn_2nd Beta-prop_HPS5 Beta-prop_Nup120_160 Ge1_WD40 Cytochrom_D1 PROPPIN Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 WD_LRWD1 WDR54 Beta-prop_RIG_1st WD40_like GSDH DUF2415 Nucleoporin_N Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 101358268
NCBI-ProteinID: XP_012414257
UniProt: A0A2Y9G0Y2
LinkDB
Position
Unknown
AA seq 346 aa
MPRPFLSSSLRVAVARSLASEVQRGSEASCLAFSPSSLVKEMTNQYSILFKQEQAHDDAI
WSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIA
ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK
KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS
PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW
DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCPI
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgccccgccccttccttagctcatcgctacgcgtcgctgtcgcgcggagtctggcatca
gaagtgcagcggggtagcgaggcgagctgtctggcctttagcccttcatccctggttaag
gaaatgaccaatcagtacagtattctcttcaaacaagagcaagcccatgatgatgccatt
tggtcagttgcctgggggacaaacaagaaggaaaattctgagactgtggtcacaggctcg
ctggatgatctggtgaaggtctggaaatggcgtgacgagaggctggacctacagtggagt
ctggagggacatcagctgggggtggtgtctgtggacatcagccacaccctgcccattgct
gcatccagttctcttgatgctcatattcgtctctgggacttggaaaatggcaaacagatc
aaatctatagatgcaggacctgtggatgcctggactttggccttttctcctgattcccag
tatctggccacaggaactcatgttggaaaagtgaacatttttggtgtggaaagtgggaaa
aaggaatattctttggacaccagaggaaaattcattcttagtattgcatatagtcctgat
gggaaatatctagccagtggagccattgacggaatcatcaatatttttgatattgcaact
ggaaaacttctacacacgctggaaggccatgctatgcccattcgttccttgaccttttcc
ccggattctcagctccttgtcactgcttcagatgatggctacatcaagatctatgatgta
caacacgccaacttggctggcacactgagtggccatgcatcctgggtcctgaatgttgcg
ttttgtcctgatgacactcactttgtttccagttcatctgacaaaagtgtaaaagtctgg
gatgttggaacgaggacttgtgttcacaccttctttgatcaccaggatcaggtctgggga
gtaaaatacaatggaaatggttcaaaaattgtgtctgttggagatgaccaggaaattcac
atctatgattgtccaatttaa

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