Trichechus manatus latirostris (Florida manatee): 101358281
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Entry
101358281 CDS
T05135
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101358281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101358281
03036 Chromosome and associated proteins [BR:
tmu03036
]
101358281
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101358281
Coactivators
SAGA/TFTC/STAGA complex
101358281
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101358281
STAGA complex
101358281
TFTC complex
101358281
SAGA complex
101358281
SLIK complex
101358281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
101358281
NCBI-ProteinID:
XP_004370158
UniProt:
A0A2Y9D9T0
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGQPTLLPPQAGDGAGEGGGGTTNNGPNGGGGNVAAAASAGGD
GGTPNPVVAVSAAAPAGAAPVPTAAPEVGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEADGTGAEAASALLSRVTASAPGPAAPDPPSTAASGATTVSGSASA
PAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPAMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggacag
ccgacgctgctacctccgcaggctggggacggcgctggcgagggtggcggcggcactacc
aacaacggccccaacggtggcggcgggaacgttgcggcggcggcgtcggccggtggggat
ggcgggaccccaaatcccgtggtggctgtctccgctgctgccccggcgggggcggcccca
gtgcccaccgcagctccggaggtcggtgctccccacgaccgacagactctgctggctgtg
ctgcagttcctacggcagagcaacctccgtgaggccgaagaggctctgcgccgcgaggcc
cggctactggaggaggcagtggcgggctccggagccccaggagaagcggacggcaccggg
gccgaggcggccagcgcgcttcttagccgggtcaccgcctcggcccccggcccagcagcc
cccgatcctccgagcaccgccgcgtcgggggccaccaccgtctcaggctcagcctcagct
cctgccgctccggggaaagttggaagtgtagctgtggaagaccagccagatgttagtgct
gtgctgtcagcttacaaccagcaaggagatcctgcgatgtatgaagaatactatagtgga
cttaagcacttcatcgaatgttctctggactgccatcgggcagagctatcccaactcttt
taccccctgtttgtgcatatgtacttggagctagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaagatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagagcca
gaaattgaggtgcctttggatgatgaagatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaaaaagcctaaaaaagatagtattggatccaaaagcaaaaaacaagatcccaat
gctccacctcaaaacagaatccctcttcctgagttgaaagattctgataagttggataag
ataatgaatatgaaagaaaccactaaacgagtacgccttggtccagactgcttaccctct
atctgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgttactgat
gattctagtctcattgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cccaaaaagcttcgcagtgtgaaacaagccgcagatcttagcctcatagacaaagaatct
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccggacaggaactacctgctttcc
tcttcagaagatggcactgttagattgtggagtcttcaaacattcacttgtttggtagga
tataaaggacacaactatcctgtatgggacacgcagttttctccatatggatattatttt
gtgtcaggaggtcatgaccgagtagctcggctctgggctacagaccattatcagccttta
aggatatttgctggacatcttgctgatgtaaactgtaccagattccatccaaactctaat
tatgttgctacgggctctgcagacagaactgtgcggctttgggatgtcctgaatggtaac
tgtgtaagaatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtacttctttgggatattggacat
ggtttgatggttggagaattaaaaggccacacagatacagtctgctcacttagatttagt
agagatggtgaaattttagcatcaggttcaatggataatacagtccggttgtgggatgct
atcaaagcatttgaagatttagagaccgatgactttactacagccactggccatataaat
ttacctgagaattcacaggagttattgttgggaacgtatatgaccaaatcaacaccggtt
gtacacctccattttactcgaagaaacttggttctagctgcaggagcttatagtccacaa
taa
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integrated database retrieval system
