Trichechus manatus latirostris (Florida manatee): 101358635
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Entry
101358635 CDS
T05135
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101358635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101358635
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101358635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
101358635
NCBI-ProteinID:
XP_004369825
UniProt:
A0A2Y9D974
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSGDAATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELTVEGNGPVENNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacgcagccacggagcaggcagctgaatatgtcccagagaaggtgaagaag
gctgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgtccgagaaacaaagggaaaactaccaagttacaaagaa
aaaatggctcaagcatatgactttgcactggataaaattggaatggaaattatgtcttat
cagatttgggtggattacatcaacttcttaaaaggcgtggaagctgttggatcttatgca
gaaaatcagagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaacatcgaacaactctggagagactataacaagtatgaagagggtatcaatattcat
ttagccaaaaaaatgattgaagatcggagtagagattacatgaatgctaggcgtgtagca
aaggaatatgagacagtaatgaaaggtttggaccgcaatgctccctcagtgcctcctcag
aatactcctcaagaagctcagcaagtagatatgtggaagaaatatatacagtgggaaaag
agcaaccctcttcgtacagaggatcagacccttataacaaaaagagttatgtttgcatac
gaacagtgcctgcttgttctgggccatcaccctgatatttggtatgaagctgcacagtat
cttgaacagtcaagtaaactgctagcagagaagggggatatgaataatgccaaattgttt
agtgatgaagctgctaatatatatgaaagagccataagcactttactaaagaagaatatg
ctgctttattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaggttcac
agtatatataacagacttctggcaattgaagatattgaccctaccttggtatatatccaa
tatatgaaatttgcaaggagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccatcatgtctatgttactgcagcactcatggaatat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctggggctcaagaaatat
ggagacattccagaatatgtcctggcctatattgactatctctctcacctcaatgaggac
aataatacccgagttttgtttgaacgagttttaacatctggaagccttcctcctgagaag
tctggagaaatatgggcccgatttctagcttttgaaagtaatatcggtgatctagctagt
attcttaaggtggagaaaagacggtttacagcattcaaagaagaatatgaaggcaaagaa
acagctttactggtagatagatacaagttcatggatttatatccttgctctgcaagtgaa
ctcaaagcactgggttataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaaacccgacactcagcagatgattccatttcagccacgacatttagcacctcca
ggcttacaccctgtccctggcggagtgttcccagtgccgcctgcagcagtagttctaatg
aaacttctccctcctcctatctgtttccagggtccttttgtacaagtggatgaactgatg
gaaatcttccgaagatgcaagataccaaatactgttgaggaagctgtaaggatcattacc
ggtggggccccagagctaactgtagaaggcaatggcccagtggaaaataacgcagtactc
accaaggctgtcaaaaggcccaatgaggattcagatgaagatgaagaaaagggagctgtt
gtccccccagttcatgacatttacagagcacggcagcagaagcgaattcggtaa
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integrated database retrieval system
