Trichechus manatus latirostris (Florida manatee): 101358660
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Entry
101358660 CDS
T05135
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tmu00535
]
101358660
04091 Lectins [BR:
tmu04091
]
101358660
Proteoglycans [BR:
tmu00535
]
Cell surface proteoglycans
Others
101358660
Lectins [BR:
tmu04091
]
C-Type lectins
Others
101358660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101358660
NCBI-ProteinID:
XP_023585408
UniProt:
A0A2Y9R1F5
LinkDB
All DBs
Position
Unknown
AA seq
2279 aa
AA seq
DB search
MALTDIDLQLQFSTSQPEALLLLAAGPADHLLLQLYSGLLQVRLVLGQEEMRLQTPAETL
LSDSVFHTVVLTVTDSWATLSVDGLLNTSAPVPGGPLEVPYGLFVGGAGSLGLPYLKGTS
RPLRGCLHAATLNGRSLLRPLTPDVHEGCAEEFSAGDDVALGFSGPHSLAAFPAWGTRDE
GTLEFTLTTRSQQAPLAFQAGGRRGDFIYVDVFEGHLRAMVEKGQGTVLLHNSMPVADGQ
PHEVSVHIDVHRLEISVDQYPTRTSNRGVLSYLEPKGSLLLGGLDAEASRHLQEHRLGLA
PGAANASLLGCMEDLSVNGQRRGLRDALLTRNMAAGCRLEEEEYEEDAYGPYEVFSTLAP
EPWLSMDLPEPCVPELGLPPIFANFTQLLTISPLVVAEGGTAWLEWRHVQPTLDLSKAEL
RKSQVLLTVSRGARHGELELDIPGAQVRKMFTLLDVVNRKARFVHDGSEDTSDQLVLEVS
VTARGPVPSCLRRGQTYILPIQVNPVNDPPRIVFPHGSLMVILEHTQKPLGPEVFQAYDP
DSACEGLTFQLLGNPVGLPVERRDQPRQPVVEFSCRELEAGSLVYIHRGGPAQDLIFRVS
DGLQASSPATLKVVAVRPAIQIRHNTGLRLAQGSTAPILPTNLSVETNAVGQDVSVLFRV
MGALQFGELQKQGAGGVEGAEWRATQAFHQRDVDQGRVRYLSTDPEHHAEDTVESLALEV
QVGQETLSNFSFPVTIQRATVWLLQLEPLHAQNTQQEALTTAHLEATVEGAGPSPISFHY
EVVQAPRKGNLRLQGTRLSDGQGFTQDDLQAGRVTYGATTRASEAVEDNFRFRVTAPSHF
SPLYTFPIYIGGDPDAPVLTNILLSVPEGGEGVISANHLFVKSLNSASYLYEIMERPRHG
RLVWRDTQDKSTMVMSFTNEDLLHGRLVYQHDDSETTEDDIPFVATRQGEGSGGNAWEEV
RGVFRVAIQPINDHAPVQTISRIFHVARGGQRLLTTDDVAFSDSDSGFTDAQLVLTRKDL
LFGSIVAVDEPTRPIYRFTQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQAS
EPYLRVANGSSLVVPQGGQGTIDTAVLHLDTNLDIRSGDEVRYHVTSGPRWGQLLRAGQP
AMAFSQQDLLDGAILYSHNGSLSPRDTLAFSVEAGPVHTDATLQVTIALEGPLPPLHLVQ
HKKIYVFQGEAAEIGRDQLEAAQEAVPPADIVFSVKTPPSAGYLVMVSHSASAGKPPNLD
PVQSFSQEAVDAGQVLYLHSRPEAWSDAFSLDVTSGLGAPLEGIRVELEVLPAAIPLEAQ
NFSVPEGGIRTLAPPLLRVTGSYFPRLPGLNLQVLEPPQHGALQREEGPQDRTLRAFSWR
EVEQQLIRYVHDGSETLTDTFVLVANASEMNRQSHPVAFTVTVLPVNDQPPILTTNTGLQ
IWEGATAPITSEALRGTDRDSEPEDLVYTIEQPSNGQVVLRTAPDTEVRSFTQAQLDGGL
VLFAHRGALDGGFHFDLSDGEHTSPGHFFYVVAQKQLLLTLEGSRTLTVCPGSIQPLSSH
SLSASSSEGTDPRHLLYHVVRGPQLGRLFHAQQESTGETLVNFTQAEVTAGNVLYEHEMP
PEPFWEAHDTLELLLSSPPAPDVAATLTVTVSFDTACPQRPSRLWRNKGLWVPEGQRAQI
TVTALDASNLLASIPSPQRPKHDVLFQVTQFPTRGQLLVSEEPLHARRPHFLQSELAAGQ
LVYSHGGGGLQQDGFRFRAHLQGPTEAFVVGPQTSEAFVITVRDVNERPPQPQVSVPLQL
TQGSRAPISRAQLSVVDPDSAPGEIEYKVQRAPHNGFLSLVGGSPGPVTHFTQADVDAGR
LAFTANGSSMAGTFQLSVSDGASPPLHMSLAVDILPSAIEVQLRAPLEVPQALGRASLSR
QQLQVVSDREEPDAAYHLTQGPQYGHVLVDGKPASAFSQLQIDQGQVVFAFTNFSSAHDY
FSVLALARGANASATVNVTVRALLHVWAGGPWPQGATLRLDPAVLDAGELANLTGSVPRF
RLLAGPQHSRVVRVPQARTEPRDGQLVEQFTQQDLEDGRLGLEVGRPEGRPPGPAGDSLT
LELWAQGVPPAVASLDFATEPYNAARPYSVALLSLPEAARTEAGKPENGTPTSEPGPAAS
SPMPTVAKGGFLGFLEANMFSVIIPACLVLLLLALILPLLFYLRKRNKTGKHNVQILTAK
PRNGLAGDTETFRKVEPGQAIPLTAVPGQGPPLGSQPDPELLQFCRTPNPALKNGQYWV
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggccctgaccgacatagacctacagctacagttctccacatcccagcccgaagcccta
ctgctcctggcagcaggcccagctgaccacctcctgctgcagctctactctggactcctg
caggtcagacttgtcctgggccaggaggagatgaggctgcagaccccagcagagacactg
ctaagtgactccgtcttccacactgtggtgctaactgtgacagacagctgggccacattg
tcagttgatgggctcctgaacacctcagctccagtcccaggaggccctctggaagtccct
tatgggctcttcgtgggtggcgctgggagccttggcctgccctacctgaagggaaccagt
cgccctctgagaggttgcctccatgcagccaccctcaatggccgaagcctcctccgccca
ttgaccccagacgtgcacgagggctgtgctgaagagttttctgccggcgacgacgtggcc
ctgggcttctctgggccccactctctggctgccttccctgcctggggcactcgggatgaa
ggcaccctggagtttacactcaccacgaggagccagcaggcgcccctggccttccaggca
gggggccggcgtggggacttcatctatgttgatgtatttgagggccacctgcgggccatg
gtagagaagggccagggcactgtactgctccacaacagcatgcctgtggccgacgggcag
ccccacgaggtcagtgtccacattgatgttcaccggctggaaatctccgtggaccagtac
cccacccgcacttccaatcgaggggtcctcagctacctggagccaaaaggcagtctcctc
ctcgggggcctggatgcagaggcttctcgccacctccaggagcaccgcctgggtctggcc
cctggggctgccaacgcgtccctgctgggctgcatggaggacctcagcgtcaatggccag
aggcgggggctccgggatgccttgctgactcgcaacatggcagccggctgcagactggag
gaagaggagtatgaggaagatgcctatggcccatatgaagtcttctccaccctggcacct
gagccttggctctccatggatctgcctgaaccctgtgtgcctgagctggggctgcctccc
atctttgccaatttcacccaactgctgaccatcagccccctggtggtggctgaaggtggc
acagcctggcttgagtggcggcacgtgcagcccaccctagacctgagcaaggcagagcta
cgcaaatctcaggtgctattgaccgtgagccgtggggcacgccatggtgagctagagctg
gacatcccaggtgcccaggtgcggaaaatgttcaccctgctagatgtggtgaaccgcaag
gcccgcttcgtccatgacggctctgaggacacctccgatcagctggtgctggaggtgtcc
gtgacggctcgggggccagtgccctcctgcctgcggaggggacagacctacatcctgccc
attcaggtcaatcctgtcaatgacccgccccgcatcgtcttcccacacggcagcctcatg
gtgatcctggagcacacgcagaagccactgggacctgaggttttccaggcctatgaccca
gactcagcctgtgagggccttaccttccagcttctcggcaaccctgtgggcctccctgtg
gagcgccgagaccagcctaggcaaccagtggtcgagttctcctgccgggagctggaggcg
ggaagccttgtctatatccaccgtggtggccccgcacaggaccttatattccgggtcagt
gacgggctacaggctagctccccggccaccctgaaggtggtggctgtccggccagccatc
cagatccgccacaacacagggctccgcctggcacagggctccactgcacctatcttgccc
accaacctgtcggtggagaccaatgcggtggggcaggatgtcagcgtgctgttccgggtc
atgggggccctgcagtttggggaactacagaagcagggggcaggtggggtggagggtgca
gagtggcgggccacacaggccttccaccagcgcgacgtggatcagggccgcgtgaggtac
ttgagcactgacccggagcaccacgccgaggacaccgtggagagcctggccctagaggtg
caggtaggtcaggagaccctgagcaacttctcctttccagtaaccatccagagagccaca
gtgtggctgctgcagctggagcccctgcatgctcagaacacccagcaggaggccctcacc
acggcccacctagaggccaccgtagaaggggcaggcccaagccccatctccttccactat
gaagtggttcaggcccccaggaaggggaatcttcgactacaaggcacgcggctgtcagat
ggtcagggcttcacccaggatgacttgcaggctgggcgggtgacctatggggccacgaca
cgggcctcggaggcagtcgaggacaacttccgcttccgtgtcacagctccatcacacttc
tcccccctctacaccttccccatctacatcggaggtgaccccgacgcccctgttcttacc
aacatcctcctctcagtgcccgagggtggagagggtgtcatctctgctaaccacctcttc
gtcaagagtctcaacagtgccagctacctctatgagatcatggagcgaccccgccatggg
aggttggtatggcgggacacacaagacaagtccaccatggtgatgtccttcaccaatgaa
gatctgctccatggccgactggtctaccagcatgacgactccgagaccacggaagatgac
attccatttgtggctacccgtcagggcgagggcagtggtggcaatgcctgggaggaggtc
cggggcgtctttcgtgtggccatccaacccataaatgatcacgccccagtgcagaccatc
agccgcatcttccatgtggcccggggtgggcagcggctactgactacagacgacgtggcc
ttcagtgactctgactcaggttttactgatgctcagctagtgctgacccgcaaggacctc
ctcttcggcagtattgtagctgtggatgagcccacacggcccatctaccgcttcacccaa
gaagacctcaggaaaaggcgggtcctattcgtgcactcaggggctgaccgtggctggatc
cagctgcaggtgtctgacgggcagcaccaggccactgccctgctcgaggtgcaggcttca
gagccttacctccgtgtggccaatggctccagcctcgtggtccctcaggggggccagggc
accattgacacagccgtgctccacctggacaccaacctagacatccgcagtggggatgaa
gtccgctaccatgtcacatctggcccacgctgggggcaactgctccgggctggccagcca
gccatggccttctcccagcaggacctgctggatggggccatcctctacagccacaatggc
agtctcagcccccgtgacaccctggccttctccgtggaggcagggcctgtgcacacggat
gccaccctacaagtgaccattgctctagaggggccattgcccccactacacctggtccag
cacaagaagatctacgtcttccagggagaagcagctgagatcggaagggaccaactggag
gcagcccaggaggcagtgccgcccgcagacattgtgttctcagtgaagaccccgcccagt
gctggctacctggtgatggtgtcccacagcgcctccgcaggaaagccacccaacctggac
cccgtgcagagcttctcacaggaggcagtggatgcaggccaggtcctctacctgcactcc
cgccctgaggcctggagtgatgccttctcgctggacgtgacctcaggccttggcgctccc
cttgagggcatccgcgtggagctggaggtgctgcccgctgccatccccctggaggcacag
aacttcagtgtccccgagggcggcatccgcaccctggcccctccactgcttcgcgtcact
ggatcctacttccccaggctgccgggcctcaacctgcaggtgctggagccaccgcagcac
ggggccctgcagagagaggaaggacctcaagacaggaccctccgtgccttctcctggaga
gaggtggaacagcagctgatccgctatgtgcatgatgggagcgagacactgacagacacc
ttcgtcctggtggccaacgcttcagagatgaaccgccagagccatcctgtggcctttact
gtcactgtcctgcctgtcaatgaccaaccccccatcctcaccacaaacacaggcctgcag
atatgggagggggccactgcgcccatcacttcggaggcccttaggggcacagacagagac
tcagagcccgaggacctggtgtacaccatcgagcagcccagcaatggacaggttgtgctg
cggacagcaccggacactgaggtccgcagcttcacacaggcccagctggatggtgggctc
gtgctgttcgcacacagaggagccctggacggaggcttccacttcgatctctccgacggt
gagcacacttcccctggacacttcttctacgtggtggcccagaagcagctgctcctcacc
ctggagggcagccggacgctgactgtctgcccagggtctatccagccgcttagcagccac
agcctaagtgccagctccagcgaaggcacggacccccgccacctgctctaccatgtggtg
cggggcccccagctgggccggctgttccatgcccagcaggagagcactggggagaccctg
gtgaacttcacccaggctgaggtgactgctgggaatgttctgtatgagcacgagatgccc
cccgagcccttctgggaggcccacgacactctggagctccttctgtcctcaccccctgcc
cctgatgtggctgccaccctcactgtgaccgtgtcctttgacactgcctgtccccagcgc
cccagccgcctctggaggaacaaaggtctttgggtccctgagggccagcgggcccagatc
accgtgactgccctcgatgcctccaacctcctggccagcattccgtcgccccagcgcccc
aagcacgatgtgctcttccaggtcacgcagttccccacccgaggccagctgctcgtgtcc
gaggagcccctccacgccaggcggccccacttcctacaatctgagctggccgcggggcag
ctggtgtactcccatggcggagggggcctccagcaggatggcttccgcttccgcgcccac
ctccaggggccgacggaggcctttgtggtggggccccaaacctcagaggcctttgtcatc
acagtgcgggatgtgaatgagcggccacctcagccccaggtctcagtcccgctccagctt
acccagggctcccgggcccccatctcccgggcccagctgagtgtagtggatccagactca
gcccctggggagatcgagtacaaggtacagcgggcaccccacaatggctttctgagcctg
gtggggggcagcccaggacctgtgacccacttcacccaggccgacgtggatgcagggagg
ctggccttcacggccaatgggagcagcatggcaggtactttccagctgagtgtgtctgat
ggggccagcccacccttgcacatgtccctggccgtggacatcttgccatctgccattgag
gtacagctgcgggctccccttgaggtgccccaagccttaggccgtgcctcgctgagccgg
cagcagctccaggtggtttccgatcgggaggagccagatgcagcataccaccttacccag
ggtccccagtatggacatgtcttggtggatgggaagcccgcctcagctttcagccagctc
cagatagaccaagggcaggtggtctttgctttcaccaacttttcctctgctcatgactac
ttcagtgtcctggcactggcccggggtgccaatgcgtcagccacagtgaacgtcactgtg
agggctctgctgcatgtctgggcaggtgggccgtggccccagggtgccaccctgcgcttg
gaccctgccgtcctagatgcaggtgagctggccaacctcacgggcagtgtgccccgcttc
cgcctcctggcaggcccccaacacagccgtgtggtccgtgtgccccaggccaggacggag
cccagggatggccagcttgtggagcagttcacccagcaagaccttgaggatgggaggctg
ggtctggaagtgggcaggccagagggtcggccccctggccccgccggcgacagcctcact
ctggagctgtgggcacagggggtcccgcccgctgtggcttccttggactttgccactgag
ccttacaatgcagccaggccctacagcgtggccctgctcagtctccctgaggctgctcga
acagaagcagggaagccagagaacggcacacccacaagtgagccaggcccagcagcatcc
agccccatgcccaccgtggccaagggaggcttcctgggcttcctcgaggccaacatgttc
agcgtcatcattcccgcgtgcctggtcctcctgctcctggctctcattttgccactgctc
ttctacctccgcaaacgcaacaagacaggcaagcacaacgtccagatcctgaccgccaag
ccccgcaacggcctagccggggacactgagaccttccgcaaggtggagccaggccaggcc
atcccgctgacggcagtgcctggccaggggcccccactgggcagccaacctgacccagag
ctgctgcagttctgccggacacccaaccctgccctcaaaaatggccagtactgggtatga
DBGET
integrated database retrieval system
