Trichechus manatus latirostris (Florida manatee): 101358683
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Entry
101358683 CDS
T05135
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04330
Notch signaling pathway
tmu05017
Spinocerebellar ataxia
tmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101358683
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101358683
05022 Pathways of neurodegeneration - multiple diseases
101358683
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GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
101358683
NCBI-ProteinID:
XP_012412909
UniProt:
A0A2Y9FZ37
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Position
Unknown
AA seq
809 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPTTSRPSEEKAPALPHDNHRAEGSPWFSSHPGGQGHGGGRH
GPAGTSAELGLQQGIGLHKSLSTGLDYSPPSAPRSIPATATLPTVYPPPPSGTPVSPVQY
AHLPHTFQFIGSSQYSGPYAGFIPSQLISPTANPATSAVASAAVAASPSQRSQLEAYSTL
LANMGGLSQASGHKAEQQQQQHLSRTPGLVTAGSPPPTQQNQYVHISSSPQSSGRTASPP
ALPVHLHPHQTMIPHTLTLGPSPQVVVQYTDSGGHFVPRESAKKAESSRLQQALQAKEIL
NGEMEKSRRYGVPPSADLGLVKAGGKAAVHPYESRHMVVHPSPADYGTRDVPGVRASVMV
LPDSNTPASDLEVQQVSHREASPSTLNDKSSLHVGKTSHRSYGLSPQQALGPEGVKAAVA
TLSPHSVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPG
TQPLLIPVGNADMDTAGAASTIVTSSPQFAAVPHTFVTTAIPKSENFSPEALAAPAAYPA
MVQAQIHLPVVQSLASPSAVPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISS
DLKIDSSTVERIADGHSPGVAVIQFAVGEHRAQVSVDVLVEYPFFVFGQGWSSCCPERTS
QLFDLPCSKLSVGDVCISLTLKNLKNGSVKKGQSVDPASVLLKHSKTDSLAGGRHRYTEQ
ENGINQGSAQMLSENGELKFPEKIGLPAAPLLTKIEPSKPTATRKRRWSAPETRKLERSE
DEPPLTLPKPSLIPQEVKICIEGRSNVGK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaatgaatgcctgcctcccaagaaacgcgagatcccc
accaccagccggccctccgaggagaaggccccggcactgccccacgacaaccaccgggct
gagggctcgccatggttctccagccatccagggggccagggccacggaggcggccggcac
gggcctgcggggacttccgcggagctcggtttacagcagggaataggtttacacaaatcc
ttgtccacggggctggactactccccacccagcgccccccgctccatcccggccaccgcc
acgctccccacggtgtacccacccccgccatcggggacgccggtgtcccccgtgcagtac
gcccacctgccacacaccttccagttcattgggtcctcccagtacagcgggccctacgcc
ggcttcatcccctcccagctgatctccccgacggccaatcctgccaccagcgcggtggcc
tcagccgccgtggccgcctctccgtcccaacgctctcagctggaggcctattccacgctg
ctggccaacatgggcgggctgagccaggcctcgggacacaaggctgagcagcagcagcag
cagcacttaagcaggactccggggctggtgaccgcgggctcccctccacccacccagcag
aaccagtatgtccacatttccagctccccgcagagctcggggcgcacggcctctccgccg
gccctccccgtccacctgcacccccatcagacgatgatcccgcacacgctcaccctgggc
ccctccccccaggtggtggtgcagtacacggactctggcggccacttcgttcctcgcgag
tccgccaagaaggccgagagcagccggctgcagcaggccttgcaggccaaggagatcctc
aacggggagatggagaagagccggagatacggggtgcccccctcggcggacctgggcctg
gtgaaggcgggcggcaaggcggcagtccacccctatgagtccaggcacatggtggtccac
ccgagccccgccgactacggcacccgagatgttcccggggtccgggcctctgtgatggtc
ctgcccgacagcaacacgcccgcctcggacctggaggtgcagcaggtctcccacagggag
gcgtccccctccaccctcaatgacaagagcagcttgcacgtagggaagaccagccacagg
tcttacgggctgtccccgcaacaggccctgggccctgaaggcgtgaaggccgctgtcgcc
accttgtccccccactcggtcatccagacgactcacagcgcctccgagcccctccccgtc
ggcctgccagccacggccttctatgcagggacccagcccccggttatcggctacctgagc
ggccagcagcaagcaatcacctacgccggcagcctgccccagcacctggtgatcccgggc
acccagcccctgctcatcccggttggcaacgcggacatggacacggcgggggcagcctcc
accatcgtcacatcgtcaccccagttcgctgcagtgccccacaccttcgtcaccaccgcc
atcccgaagagcgagaacttcagcccggaggccctggccgcgcccgctgcctacccggcc
atggtgcaggcccagatccacctgccggtggtgcagtcgcttgcctcgccctcggcggtg
cccccgacactgcctccctacttcatgaaaggctctatcatccagctggccaacggggag
ctgaagaaggtggaggacttgaaaacggaggatttcatccagagcgcggagattagcagc
gacctgaagatcgattccagcacggtggagaggatcgctgacggccacagcccgggggtc
gccgtgatacagtttgccgttggggagcaccgagcacaggtcagcgtggacgttttggta
gagtatcctttttttgtgtttggacagggctggtcatcctgctgtccggagagaaccagc
cagctctttgatttgccgtgttccaaactctcagttggggatgtctgcatctcgcttacc
ctcaagaacctgaagaacggctctgttaaaaagggccagtccgtggatcccgccagcgtc
ctgctaaagcactcaaagaccgacagcctcgcgggtggcagacacaggtacacggagcag
gaaaatggaatcaatcagggaagtgcgcagatgctctctgagaatggagaactgaagttt
ccagaaaaaataggattgcctgcagcgcccttactcaccaaaatagaacccagcaagccc
acggcaacaagaaagaggaggtggtcggcgccggagacccgcaaactggagaggtcagaa
gatgagccacccctgactcttcctaagccttctctaattcctcaggaggttaagatttgc
attgaaggtcggtctaacgtaggcaagtaa
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