Trichechus manatus latirostris (Florida manatee): 101358734
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Entry
101358734 CDS
T05135
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101358734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101358734
Spliceosome [BR:
tmu03041
]
Complex C
Other components
Step II factors
101358734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
101358734
NCBI-ProteinID:
XP_004372519
UniProt:
A0A2Y9DDC2
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDSEGGRCSLPAADSLMHLTKSPSAKPSLTVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDSHQVSTKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEDEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTIPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYEDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcaattgcagctttggctgcttcctatggttcgggttcaggatccgaatcg
gactcggacagtgagggtggacggtgttcgctgccagccgccgattccctcatgcacttg
actaaatcgccttcggccaagccctctctgacagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaagttcaa
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcagatggctgcccctagaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaaggagaacttttgccacatacggttatgcattggac
ccttcattagatagtcatcaagtgtctactaaatatattggttctgtagaagaagcagaa
aaaaatcaaggtttaactgtgtttgaaactggtcagaagaaaacagaaaagaggaaaaag
ttcaaagaaaatgatgcatcaaatattgatggtttcttgggaccatgggcaaaatatgtg
gatgaaaaagatgtagccaaaccttcagaagaagaacaaaaagaattggatgaaattaca
gcaaagaggcagaagaaaggcaaacaggaagatgagaagcctggggaggaaaagacaatc
ttacatgtcaaagaaatgtatgactatcagggcaggtcctatcttcacatacctcaagat
gttggtgttaatctccggtcaactataccacctgagaagtgttatctcccaaaaaaacaa
atacatgtgtggtccgggcacacaaagggtgtcagtgcagtcagattgtttcctctctct
ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgaa
gaccggcgctgtctgcgaacatttattggtcacagtaaagctgttagggacatctgcttc
aatactgcagggacacagttcctcagcgcggcctatgataggtatcttaagctctgggac
actgagacaggacaatgtatatcaagatttacaaacagaaaagtaccctattgtgtcaaa
tttaatcctgatgaagataagcaaaatctatttgtggctgggatgtctgataaaaaaatt
gtacagtgggacattcgaagtggagaaattgtgcaggaatatgatcggcatttgggagct
gtcaacaccattgtttttgttgatgagaatagaagatttgtaagcacatctgatgataag
agcctgagagtttgggaatgggatatccctgtggatttcaagtatatagcagagcccagt
atgcactcgatgcctgcagtgactttgtctccaaatgggaagtggctagcatgccagtca
atggacaatcaaatcttaatttttggagcacagaacagatttagattaaataagaaaaaa
atttttaagggtcatatggtagcaggatatgcttgtcaggtggacttttcaccagacatg
agctatgtgatttcaggagatggaaacggaaaattaaacatttgggactggaagaccaca
aaactctacagtcggtttaaagctcatgataaagtgtgtataggtgcagtgtggcatcct
catgaaacatctaaagtcataacatgtggttgggatggtctcattaaattgtgggattaa
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integrated database retrieval system
