Trichechus manatus latirostris (Florida manatee): 101358916
Help
Entry
101358916 CDS
T05135
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmu03009
]
101358916
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101358916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
ELMO_ARM
DUF7051
BRCT
Motif
Other DBs
NCBI-GeneID:
101358916
NCBI-ProteinID:
XP_023584720
UniProt:
A0A2Y9QMK6
LinkDB
All DBs
Position
Unknown
AA seq
2807 aa
AA seq
DB search
MKLKPVSHKTENTYRFLTFAERLGNVNIDIIHRIDRTSSYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIKNSFAYQPLLDLVVQLARDLQT
DFYPHFQDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSSIYSMYSTLLAH
NKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLDKHPEKVEGVGQLLFEMCKGVRNMFH
SCTGKAVKLILQKLGPVTETETQLPWILVGETLKNMVKSTAFYIHKEHFGTFFECLQESL
LDLHTKVTKTNCCESSEQIKRLLETYLILVKHGSGSKITNPVDVCKVLSQTLQVASLSTS
CREALLDVISALILGENVTLPETLIKETIEKTFESGFERRLILDFSEVMFPMEQFEQLFL
PSFLSYIENSFLIDDVTVKDDALAILAKLILNKAPPPTAGSMAIEKYPVVFSEQTVGSYL
KQKKTRSKGEKEQSPVLDHLLFIIQLPPNKDATYLSHSWAALVVLPHIRPLEKEKVIPLV
TCLIESLFTTVDRGSFGKGNLFVLCQAVNTLLSLEESSNLLHLVPVERVKNLILTFPLEP
SVLLLADLYYQRLSLCGCKEPLSQEALMELYSKLQANISTGVSKIRLLTIRILNHFEVQL
PELMEDDGLSERQSAFAIIRQAELVPATVSDYREKLLHLRKLRRDVVQTAVPDGPLQEVP
LRYLLGMLYVNFSPLWDPVIELISSHAHEMENKQFWKVYYEHLEKAATRAEKELQNEERD
EEKSIGDESWEQTQEGDVGTLYHKQLALKTDCWERLDHTNFRFLLWRALAKFPERVEPRS
RELSPLFLRFINNEYYPADLQVAPTQDLQRKGKRVVAEETEEDPAARDGEELEEEEVPQD
EPTQKKKTRRAAAKQLIAHLQVFSKFSNPQALYLESKLYELYLQLLLHQDQMVQKITLDC
IMTYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNTAVKTAHRADLFPILMRILYGR
MKNKTGTKTQGKSASGTRMSIVLRFLAGTQPEEIQIFLDLLFEPVKHFKNGECHSAVIQA
TEDLDLSKVLPLGRQHGILNSLEIVLKNISHLISAYLPKILQILLCMTATVSHILDQREK
IQLRFINPLKNLRRLGIKMITDIFLDWESYQFRTEEIDAVFHGAVWPQISRLGSESQYSP
TPLLKLISIWSRNARYFPFLAKQKPGNPECDILTNVFAILSAKNLSEATASIVMEIADDL
LTLPDFEPTETVLSLPVTGCEYTDVAENADESITIGGRLILPHVPVILQYLRKTTISAEK
VKKKKNRTQVSKELGILSKISKFMKDREQSSLLITLLLPFLHRANIAQETEVDILVTVQN
LLKHCSDPTSFLKPLSRLFSVIKNKLSRQLLCAVFQSLSDFESGLKYITDVVKLNAFDQR
HLDDINFDVRFSTFQTISSYVKEMQTVDVNYLIPIMHNCFYNLELGDMSLSDNASVCLMS
IIKRLAALNFTEKEYREIIHRSLLEKLRKGLKSQTESIQQDYTTLLSCLIQTFPDQPEFK
DLVQLTDYHDPEMDFFENMKHIQIHRRARALKKLAKQLMEGKIVLSSKSLQNYIMPYAMT
PIFDEKMLKHENITIAATEVIGAVCKHLCWSAYMYYLKHFIHVLYTGQINQKLGVSLLVI
VLEAFHFDHKTLEEQMGKIQSEESDFCCLLNIDTIEVIEIPEDKATELEEEGKDGGEKEN
RCESLSDNNEELGNPDAADSEETSAKESECITKSVSFLPQNKEELERTIKNIQGTITGDI
LPKLHKCLASTTKREEEHKLVKSKVVNDEEVVRVPLAFAMVKLMQSLPQEVMDANLPSIL
LKVCALLKNRAQEIRDVARSTLAKIIEDLGVHYLQYILKELQTTLVRGYQVHVLTFTVYM
LLQGLTNKLQVGDLDSCLDIMIEIFNHELFGAIAEEKEVKQILSKIMEARRSKSYDSYEI
LGKFVGKDQVTKLILPLKEILQNTTNLKLARKVHETLRRIIAGLIVNQEMTAESILLLSY
GLVSENLPLLTEKEKNPAAPPPDPRLPPQSCLLLPPTPVRGGQKALVSKKTNMHIFIESG
LRLLHLCLKNSKIKSSSEHVLEMLDPFVSLLIDCLGSMDVKVITGALQCLIWVLRFPLPS
IETKAEQLTKHLFLLLKDYAKLGAAKGQNFHLVVNCFKCVTILVKKVKSYQITEKQLQVL
LAYAEEDIYDTSRQATAFGLLKAILSRKLLVPEVDDVMRKVSKLAISGQSEPVRVQCRQV
FLKYILDYPLGDKLRPNLEFTLAQLNYEHETGRESALEMIAYLFDTFPQGLLHENCGMFF
IPLCLMMVNDDSAACKKMAAVTIKSLLSKINLEKKDWLFDMVTTWFGRKKSLNRQLAALI
CGLFVESEGIAFERRLGTVLPVIEKEIDPENFKDIVEETEEKAADRLLFSFLTLISKLIK
ECNIIQLTRPSEVLSKIWSHVHAHLRHPHNWVWLTAAQIFGLLFASCQPEELVRKWNAKK
TKKRLAEPVAIRFLTSDLDQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLL
VPDSEDKQDETKEDREEQGALGDGVAKEEVEGRQVCTDEKVESDKEENDEAKEEPSKPAT
LLWLILKVSRMAKLEAAYSPRNPLKRTCIFKFLGAVAMDLGADKVKLYLPMIIAPLFREL
NSTYSEQDPLLKNLSQEIIELLKKLVGLESFSLAFASVQKQANQKRALRKKRKALEFVTN
PDIAAKKKLKKHKNKSEAKKRKIEFLRPGYKAKRQKSHSLKELAMVE
NT seq
8424 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaagcccgtttcccacaagaccgagaacacataccggtttcttacatttgct
gaacgtctagggaatgtgaatattgatattattcaccgaattgatagaacttcaagctat
gatgaggaggttgaaacctacttttttgagggcctgctgaaatggagagaattgaacctt
acagaacactttggcaaattttacaaagaagttattgacaaatgccagtcattcaatcag
ttggtatatcatcaaaacgagatagttcagagtttgaagactcacctgcaaattaagaac
agttttgcctatcaaccccttttagacttggttgtgcagttggcgcgagatctgcagacg
gacttttatccacattttcaagatttttttctgaccatcacttcaatcctggagactcag
gacacggagttgttagaatgggcgttcacctcgctgtcgtatctttacaaatacctgtgg
agactgatggtgaaggacatgtccagtatatacagcatgtatagtacactcctggctcat
aacaaactgcatataagaaattttgctgctgaaagctttacttttttgatgagaaaggtt
tctgataagaatgcgcttttcaatttaatgtttcttgatcttgataaacatccagaaaag
gtggaaggagttggacagttgctctttgaaatgtgcaaaggagttagaaacatgtttcat
tcttgtacaggcaaggcagtcaagctgattctgcaaaagctaggacctgttactgaaaca
gaaactcaactaccatggatcttagttggagaaacactcaaaaacatggtaaaatccact
gcgttctacatccacaaggaacattttggtacattttttgaatgtttgcaagaatcactc
ctggatctacatacgaaagtaaccaaaactaactgttgtgaaagttctgaacagattaaa
aggttgttggaaacatacctgatacttgtgaaacatggaagtggatcaaagataaccaac
cctgttgatgtttgtaaggtgttgtctcaaacattgcaagtagccagtctctccacatct
tgccgggaagccctcttggatgtaatttctgctttgatcctaggcgagaatgttaccttg
ccagagacactcatcaaagaaaccatagaaaaaacttttgagagtggatttgaaagacgt
ttaattttggatttttctgaagtcatgtttcctatggaacagtttgagcagctttttcta
ccaagctttctctcatatattgagaattccttcttgattgatgacgttacagtcaaagat
gacgctctggccattttggccaaactcattctgaacaaagcaccgcctcccactgctggt
tcaatggccattgaaaagtaccctgtggttttctcagaacagacagtaggatcctattta
aagcagaagaagactagatccaagggagagaaggagcagagtccagtattggatcatctc
ttgtttataattcagttacctccaaataaagatgcgacttatctttcacattcttgggca
gccctggtagtgttacctcatatcagacctcttgagaaagagaaggtgataccactagtc
acatgccttatagagtcactcttcacgactgttgacagagggagctttggaaaaggaaac
ttatttgttctttgtcaagctgtaaatactctgctaagtttagaagaatcctctaacctt
cttcatttggttcctgtggaacgtgtgaagaatttaatattaacatttcctttggagcca
tctgtgttgctgttggctgatctctattatcagagattatccttatgtggctgcaaagaa
ccgctttcccaggaagctttaatggaattatattcgaagttacaagcaaacatttcaact
ggtgtatccaagattcggcttttgacaataaggatcctaaaccattttgaggttcaactt
ccagaactgatggaggatgatgggctctcggagcgccagtctgcctttgctataatacgc
caggcagaacttgtcccagcaactgtgagtgattacagagagaagctgcttcatttgagg
aaactaagacgtgatgtggtgcagactgcagtacctgatgggccattgcaggaggtgcca
cttcgttatttgttaggcatgttatatgttaatttcagtcctctctgggatcctgtcatt
gaactcataagttctcacgcacatgaaatggaaaataagcaattttggaaagtctactat
gaacatctagagaaagcagctacacgtgctgagaaagagctgcaaaatgaggaaagagat
gaagagaagtccattggagacgaaagttgggagcagacccaggaaggagatgttggaact
ctttatcataagcagttagcattgaaaactgactgttgggaaagactggaccataccaac
tttcgatttttgctctggcgagctctggcaaaattcccagagagagtagagccacggtcc
agggagctttccccgcttttcttgagatttatcaacaatgagtattacccagcagatctg
caagttgctccaacccaagatctgcaaagaaaaggcaaaagggtggtggcagaggaaaca
gaagaggacccagcggccagagatggtgaagagttggaagaagaggaggtgccccaagac
gaacccacacagaaaaaaaagacaagaagagctgcagcaaagcagttaattgctcattta
caagttttctcgaagttttcaaatccacaggccttatatctggaatccaagttatatgag
ctgtatcttcagttgttgttacaccaagatcaaatggtacaaaaaataaccttggattgc
ataatgacatacaagcatccgcatatcctcccttatagggaaaatttgcaaagattgctt
gaagacagaagctttaaggaggaaatagtgcattttagcatttcggaagataatacagca
gtgaaaacagcccatcgagcagatctgtttcccattctgatgaggattttgtatgggcga
atgaagaacaagacagggacgaaaactcaggggaaatctgcttcaggcacccgcatgtcc
attgttctgaggttcctcgctggtacccagcctgaggagatccagatattcttagacctg
ctgtttgaacctgtgaagcacttcaagaatggagagtgccattctgcggtcattcaagca
acagaagatttggatttatctaaagttcttcctttgggtcgtcagcatggtatcttaaat
agccttgaaatagtattgaagaacatcagtcatctgattagtgcatacttaccaaagatt
ttgcagatattgctctgtatgacagcaaccgtatctcacatccttgaccaacgagaaaag
atacaactaaggtttattaacccactgaaaaatttaagacgtcttggaatcaaaatgata
actgatatctttttggactgggagtcatatcagttcagaacagaagaaatcgatgccgtg
tttcatggtgcagtttggccccagatcagcaggcttggatctgaaagtcagtattctcct
actcctctgctgaagctaattagtatctggagcagaaatgcaagatacttccctttcctg
gctaaacagaaacccgggaacccagagtgtgatattttgaccaatgtttttgcaattctc
tcagcaaagaatctctccgaagccacagctagtattgtaatggaaatagctgatgacctt
cttacccttccagattttgagcccacagaaacagttttgagcttgccagtaacaggatgt
gaatacactgacgtagcagaaaatgcagatgagtctatcacgataggaggaagattaatt
ctacctcatgtacctgtaattcttcagtatctcagaaaaactacaataagtgcagaaaag
gtgaaaaagaaaaaaaataggacacaagtcagcaaggaacttggtattctttcaaagatc
agcaagtttatgaaagacagagaacagagttctttgctcattacacttctccttcctttc
ctccaccgtgccaatattgctcaggagacagaggttgatattctggtgacggtacaaaac
ttgttaaaacattgctcggaccctacaagcttcctcaagcctctctcaagactattctca
gttattaagaacaagttgtcgagacaattgctttgtgcagtcttccagagtctttctgat
tttgagagtggattaaagtatattactgatgttgtcaagcttaatgccttcgatcaaaga
catcttgatgatatcaactttgatgttcgcttctcaacgttccagaccatctcgtcttat
gttaaagaaatgcaaactgtggatgtgaattacctaattccgattatgcataattgtttc
tataatctggagttaggagacatgtctttaagtgataacgccagtgtgtgcttgatgagt
atcatcaaaaggctagctgccttgaacttcacagagaaagaatatcgagaaatcattcat
cgttcactcctggagaaattgagaaaagggttgaagagccagacagagagcattcaacag
gattataccacactgctttcctgtttaattcaaacctttccagatcaaccagaatttaaa
gacttggtacagcttactgattaccatgatccagaaatggacttctttgagaacatgaag
cacattcagattcacagaagagcacgagccctgaagaaactggcaaaacaactaatggaa
ggcaaaattgtgctatcttctaaatctcttcagaattacatcatgccttatgccatgact
ccaatttttgatgagaagatgctcaagcatgaaaatataaccattgctgccacagaggtt
attggggctgtatgtaaacatctctgttggtcagcatatatgtattacttgaaacatttc
attcacgtcttatatacaggacagatcaatcaaaagttgggtgtcagtttgctagtaata
gtgttagaagcgttccactttgaccacaaaactctcgaagaacaaatggggaaaattcag
agtgaagaaagtgacttttgttgtttactcaacatagacacaatagaagtgattgagata
ccagaggataaagccacagagttagaagaagaaggaaaggatggaggagagaaggaaaat
agatgtgagagtctgtcagacaacaacgaagaactgggaaaccctgatgcagctgattct
gaagagacgtcagctaaggaatcggagtgtatcacaaagtccgtctccttccttcctcag
aataaggaagaattggaaagaacaattaaaaatatccaaggaaccataactggggatata
ctacccaagctacataaatgccttgcgtctacgactaagagggaagaagagcacaagctt
gtaaagtcaaaggttgtgaatgatgaggaagtggttcgtgttcctttagcttttgccatg
gttaaactaatgcagtctctgccacaagaagtgatggatgctaacctgccaagtattttg
ctgaaagtgtgtgcccttctcaagaatagagcacaggaaatcagggacgttgcacgcagc
actcttgcaaaaataatagaggatctgggtgtgcactacctacaatatattttaaaggaa
ttacagactacacttgtccgtggctatcaggtgcatgtgctaacttttactgtttacatg
ttgctgcaaggcctcactaacaagctacaagttggggatttggactcctgtttagatata
atgattgagatttttaaccatgagttgtttggtgccattgctgaagagaaagaagtaaag
cagatcctctccaaaatcatggaggcacgaagaagcaagagttatgattcttatgaaatc
ctgggcaagtttgtaggaaaagatcaggttacaaaacttatccttccattaaaagagatc
ttacagaatactacgaatttaaaactggcccggaaagttcatgaaaccttacgccgaatc
atagcaggattaattgtgaatcaggaaatgacagcagagtccattctattgctcagttac
ggtttggtcagtgagaatcttcccctgttaacagagaaagaaaaaaatccagcagcccct
ccaccagatccacgtctaccaccccagagctgtcttttgctccccccaactccagttcga
ggtggacagaaagccctcgtgagcaagaagaccaacatgcacatatttattgagtctggg
cttcggctgctgcatctgtgtctgaagaattctaagattaagtcttcaagtgagcatgtt
ttggaaatgttggatccttttgtgtctctcctcatagactgcctgggttccatggatgtg
aaggtgatcacaggtgctttacaatgcctcatctgggtcttgaggttccccctgccttcc
atagaaacaaaagcagaacagctgacgaaacacctattccttttgctgaaggactatgca
aaactaggagctgccaagggccagaacttccacctggtggtaaattgcttcaagtgtgtg
accatacttgtgaaaaaagtgaagtcttatcagataaccgaaaaacagctgcaagtccta
ctggcgtacgcggaggaggacatctatgatacctcaagacaagcaactgcatttggcctt
ctcaaggccattttatcaagaaagttgttggttccagaagtagatgatgtcatgcggaaa
gtatccaagttggcaatttctggacaaagcgaacccgtcagagtccagtgcagacaggtt
ttcctgaaatatattcttgactatccccttggtgacaaattgagaccaaacttggaattc
acgctcgctcaactgaattatgaacacgagaccgggagagagtccgccttggaaatgatc
gcctatctctttgacacattccctcagggactgctccacgagaactgcgggatgttcttc
attcctctttgtctaatgatggtgaatgatgactctgccgcgtgcaaaaagatggcggcc
gtgacaatcaagtctttactcagtaaaatcaacctggagaaaaaagattggctgttcgac
atggttaccacctggttcggtcggaaaaagagcttaaatagacaactggctgccctgatc
tgtggtttattcgtggagagtgaagggattgcttttgagaggagacttgggactgttctt
cctgtgattgaaaaggaaattgatcctgaaaactttaaagatatagtggaagagactgaa
gaaaaagcggcagatcgccttctgtttagcttcctcacactgataagtaaactcatcaag
gaatgtaatattattcagcttaccagaccctcggaggttttgagtaaaatctggagtcac
gtgcacgctcacctgaggcatccacacaactgggtgtggctcactgcagctcagattttt
ggattgctctttgcctcttgccaaccagaggagcttgttagaaaatggaacgccaaaaag
actaaaaagagacttgcagaacctgtagcaatcaggttcctaacaagtgaccttgaccaa
aagatgaaaagtatctctttagcttcttgccatcagttgcattccaaattcctggatcag
tctctaggagagcaggttgttaagaatttgttgtttgtagccaaagtcttgtatttactg
gtacctgattctgaggataagcaagatgagacaaaagaagacagggaagaacaaggagct
ttaggagatggtgttgccaaagaggaagtggaaggacgccaggtctgtacagatgagaaa
gtggagtctgacaaggaggagaacgacgaggcgaaggaggagcccagcaagccagccacg
ctgctctggttgatcctgaaggtgtcccggatggcaaaactggaagccgcttattcgcct
agaaaccccttaaagagaacatgcatctttaaattccttggcgcagtagcgatggatctg
ggagcagacaaggtgaagctctatctcccaatgatcatagcacctttgtttcgagagctg
aacagcacctattcggaacaagatcctttgctgaagaatctatcccaggaaatcatagaa
ctactcaaaaagctggtggggctcgagagcttctcattagcctttgcatctgtgcaaaaa
caggcaaatcagaaaagggcactccggaaaaagaggaaggctttggagtttgtaactaat
cctgatattgctgccaagaaaaagctgaagaaacacaaaaataaaagtgaagcaaagaag
agaaaaatagagttcctgcgtccaggctataaggccaagaggcaaaaaagccacagccta
aaagagttagcaatggtggagtaa
DBGET
integrated database retrieval system
