KEGG T05135: 101358918

Trichechus manatus latirostris (Florida manatee): 101358918

Entry

101358918         CDS       T05135

Name

(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

tmu Trichechus manatus latirostris (Florida manatee)

Pathway

tmu03015

mRNA surveillance pathway

tmu05164

Influenza A

Brite

KEGG Orthology (KO) [BR:tmu00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101358918
09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    101358918
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tmu03021]
    101358918
   03019 Messenger RNA biogenesis [BR:tmu03019]
    101358918
Transcription machinery [BR:tmu03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     101358918
Messenger RNA biogenesis [BR:tmu03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101358918

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 zf-CCCH_4 zf-C3H1

Other DBs

NCBI-GeneID:

101358918

NCBI-ProteinID:

XP_012410360

UniProt:

A0A2Y9FW04

LinkDB

Position

Unknown

AA seq 214 aa
MGRHPGRRAEPAEGSALLHQPRAWVSGHRESGSAVCNFFLKGLCGKGKRCPFRHDSGGKT
VVCKHWLRGLCKKGDQCKFLHQYDLARMPECYFYSKFGDCNNKECPFLHVKPASKTRDCP
WYDQGFCKNGPLCKYRHVHRVMCINYLAGFCPEGPKCQFAHPKMNLLLFSPSSVKVSVGR
DVQMSHLLHLSLSPRERCSLVSAAPFPVDPHHFA

NT seq 645 nt +upstreamnt +downstreamnt
atgggccgccaccctgggcgccgcgcggagcccgccgaggggagcgcactgctgcaccag
ccccgcgcttgggtctctgggcaccgagagtcgggctcagctgtgtgcaacttcttcttg
aaagggctctgtgggaaaggtaagcgctgccccttccggcatgacagcggcgggaagacg
gtggtgtgcaaacactggctgcgggggctgtgcaagaagggcgaccagtgcaagttcctg
caccagtacgacctggccaggatgcccgagtgctacttctactccaagttcggtgattgc
aataataaggagtgtcccttcctccatgtgaagccagcttccaagacccgagactgtcct
tggtatgatcaaggtttctgcaagaacggtcccctgtgcaaataccgccatgttcacaga
gtgatgtgtatcaactacttagctggcttctgccctgagggacccaaatgccaatttgca
catcccaagatgaacctgcttttattcagtcccagttctgtgaaggtgagcgtgggcagg
gacgtgcagatgtctcatttactccacttgtcactgtcccccagggaacgctgctcccta
gtgtcggcggcaccgttcccagtggaccctcaccatttcgcatga

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