Trichechus manatus latirostris (Florida manatee): 101359903
Help
Entry
101359903 CDS
T05135
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101359903
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101359903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
101359903
NCBI-ProteinID:
XP_004381653
UniProt:
A0A2Y9DUR4
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MALGLQRARSSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLT
ISYLRMHRLCAAGEWNQVGAGGEALDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLS
QLELIGHSVFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN
LKAATWKVLHCSGHMRAYKPPAQTPPDLEPPLQCLVLICEAIPHPGSLEPPLGRGAFLSR
HSLDMKFTYCDERIAEVAGYSPEDLIGCSAYKYIHALDSDAVSKSIQTLLSKGQAVTGQY
RFLARSGGYLWTQTQATVVSGGRGPQSESIVCIHFLISRVEETGVVLSLEQTERHSRRPA
QRATTSQKDAPSPGDSLDTPGPQILAFLHPPALSEAALAADPRRFCSPDLRRLLAPILDG
VSAAATPSAPPTARHPQSPLLADLPSELLVDVENSHKLFASGKDLEAVETDLDIVQDVDA
LDLEMLAPYISMDDDFQLNSSEQLPRAHHRPPGTVPRPRARSFHGLSPPTPEPSLLPRWG
SDPRLSCYSPSKGEPSAPFPMAGARKRTLAQSPEDEDEGVELLGVRPPKRLPSSEPEHFL
LPPLSLSFLLTGGPAPGSQQDPRTHLLDLSEPLGLGPSLISVYSDVDTAQPRNRLQPAAG
LAQVN
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggctgcagcgcgcaaggtcaagcaccgagctgcgcaaggagaaatcccgg
gacgcggcccggagccggcgcagccaggagaccgaggtgctgtaccagcttgcgcacacg
ctgcccttcgctcgcggggtcagcgcccacctagacaaggcctccatcatgcgcctcact
atcagctacctgcgtatgcaccgcctctgcgctgcaggggagtggaaccaggtgggagca
gggggagaagcactggatgcctgttacctgaaggccttggagggcttcgtcatggtgctc
acagctgagggagacatggcttacctgtcggagaatgtcagcaaacatctgggcctcagt
cagcttgagctcatcggacatagtgtctttgatttcatccatccctgtgaccaagaggag
cttcaggatgccctgacccccaggcagagcctgtccaagaagaagccagaggctcccact
gagcggtgcttttccttgcgcatgaagagcaccctcaccagccgcgggcgcaccctcaac
ctcaaagcggccacctggaaggtgctgcactgctccgggcacatgagggcctacaagccc
cctgcacagacgccccccgacctggagccccccctgcagtgcctggtgctcatctgtgag
gccatcccccacccgggcagcctggagcccccgctgggccggggggccttcctcagccgc
cacagcctggacatgaagtttacctactgtgacgagaggattgccgaggtcgctggctac
agccctgaggacctgattggatgttctgcctacaagtacatccacgccctggactccgac
gcggtcagcaagagcatccagaccttgctgagcaagggccaggcagtaacgggacaatat
cgcttcctggcccggagtggtggctacctgtggacccagacccaagccactgtggtgtca
gggggccggggcccccagtctgagagtattgtctgcatccacttcctgatcagccgggtg
gaagagaccggagtggtgctgtccctggagcagacggagcgacactctcgcagacccgct
cagcgggccaccacctctcagaaggatgcccccagtcctggggacagcctcgacacccct
ggtccccagatcctggccttcctgcatccccctgccctgagtgaagctgccctggccgct
gaccctcgccgtttctgtagccctgacctccgccgcctcctcgcgcccatcctggatggg
gtttcggcggctgccacccccagcgcacccccgactgcacggcacccccaaagtcctctt
ctggctgatctccccagtgagttacttgtggatgtggagaattcacacaaactctttgcc
tctgggaaagacctcgaggcagtggagacagatctagatatagttcaggacgtcgatgct
ctggatttggagatgctggccccttacatctccatggatgatgacttccagctcaactcc
agtgagcagctacccagagcccaccacagacctccagggactgttccccggccacgcgct
cggagcttccacggcctgtcacccccaacccctgagccctccctgctgccccgctggggg
agtgatccccggctgagctgctacagcccctccaaaggggaaccctcagcacccttcccc
atggctggggctcggaagaggaccctggcccagagcccagaggacgaggacgaaggggtg
gagctactgggagtgagaccccccaagcgtctccccagctcagagcccgaacactttctg
ctgcctcccctcagcctgagtttccttctgacaggaggaccagccccagggagccagcag
gatcccagaacccacctcctggacctgagtgagcccctgggcctgggcccctcgctgatc
tctgtctactcggatgtggacaccgcccagcccaggaaccgcctccagccagcggcaggc
ttggcccaggtcaactga
DBGET
integrated database retrieval system
