Trichechus manatus latirostris (Florida manatee): 101360270
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Entry
101360270 CDS
T05135
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmu03009
]
101360270
03036 Chromosome and associated proteins [BR:
tmu03036
]
101360270
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101360270
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
Pre-60S particles
Helicases
101360270
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101360270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
101360270
NCBI-ProteinID:
XP_004386445
UniProt:
A0A2Y9E593
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MPGKLLSDATLESEKTMGKLEISRKQNEKKAKKEKPKSNKTEEPAEEKEETISPKAKKIK
KKAEPSEVEIDSPKSKKVKKMEEPPQDGTTSLKTKNVKKKKEPVENQVVSPKIKKAVKNE
EPSEEETGAPEPKKMKKEMGMNGEIGEKKPKLKNGLPHSGPASNCNEAISEESNSEVEQE
IPVEEKEGAFSNFPISEVTVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTF
SFAIPLIEKLQGELQDKKRGRPPQVLVLAPTRELANQVSKDFRDITKKLAVACFYGGTPY
GGQFDNMRNGIDILVGTPGRIKDHLQSGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILS
VAYKKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKC
HWTHRAAVIGDVIRVYSGYHGRTIVFCETKKEAQELSQNASIKQDAQSLHGDIPQKQREI
TLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGVCI
CFYQYKEEYQLAQVEQKAGIKFKRIGVPSATEIVKASSKDAIRYLDSVPPTAISHFKQSA
EKLIEEKGAVEALAAALAHISGATAVDQRSLINLDVGFVTMILKCSIEMSNISYAWKELK
EQLGEDIDSKIKGMVFLKGKLGVCFDVPTAAVTEIQEKWHDSRRWQLSVATEQPELEGPR
EGYRGSRGPREGNRGFRGQREGSRGGFRGRREGSRGGFRGQRSGGGNRNNRFQNKGQKRS
FNKAFGQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccttagtgacgccactttggaatcagagaagaccatgggaaaactg
gagatatcgcgaaagcaaaatgagaagaaagctaagaaagagaagccaaaatctaataag
actgaagagccagcagaagaaaaggaggaaactatttctcccaaagctaaaaaaattaaa
aagaaagcagagccttctgaagttgagattgattctcctaagtccaaaaaggtaaaaaag
atggaggagccgcctcaagatggcactacttctcttaaaaccaagaatgtgaaaaagaaa
aaggaacctgttgaaaatcaagttgtttctcctaaaatcaaaaaagcagtaaaaaatgag
gagccttctgaagaagaaacaggtgctcctgagcccaagaagatgaagaaagaaatggga
atgaatggagaaattggagagaaaaagcccaaactgaagaatggactccctcattctgga
cctgcctctaactgcaatgaagccataagtgaagaaagtaacagtgaggtagaacaggaa
ataccagtggaagaaaaagaaggagcattttctaattttcccatttctgaagtgactgtt
aaacttctcaaagcccgtggggtgaacttcctgtttcctatacaagcaaagacgtttcat
catgtctatagtgggaaggatttaattgcgcaggcacggacaggaactgggaaaacattc
tcctttgccatccccttgattgagaaacttcagggagaactacaagacaagaagagaggc
cgtccccctcaggtactggttcttgcacctacaagggagttggcaaaccaagtaagcaaa
gacttcagagacatcacaaaaaagctggcagtggcttgtttttatggtggaacgccctat
ggaggtcaatttgacaacatgcggaatgggattgacatcctggttgggacgccaggtcgt
atcaaagatcacctacagagtggcaagctagacctcaccaaacttaagcatgttgtcctg
gatgaagttgaccagatgttggacatgggttttgctgatcaagtggaagagattttaagt
gtggcatacaagaaagattcagaagacaatccccaaactttgcttttttctgcaacttgc
cctcattgggtatataatgttgctaagaaatacatgaaatctacatacgagcaggtggat
ctgattggtaaaaagactcagaaaactgcaataactgtggagcatctggctatcaagtgc
cactggactcacagggcagcagtcattggggacgtgatccgagtgtatagtggttatcac
gggcgcacgatcgtcttctgtgaaaccaagaaagaagcccaggagctgtcacagaacgcg
tccataaagcaggatgcccagtccttacacggagacattccacagaagcaaagggaaatc
accctgaaaggttttagaaatggtgattttggtgttttggtggcaaccaatgtcgctgca
cgtgggttagatatccctgaggttgatctggtagtacaaagctcaccaccaaaggatgta
gagtcctacattcatcgttctgggcgaacgggcagagctggaaggacaggtgtctgcatc
tgcttttatcagtacaaggaagaatatcagttggcacaagtggagcaaaaagcgggaatt
aaatttaaacgaataggtgtaccttctgcaacagaaatagtaaaagcttccagcaaagat
gccatcaggtatttggattctgtgcctcccactgccattagtcacttcaagcagtcagct
gagaaactgatagaggagaagggagccgtggaggccctggcagcagcgctggcccacatt
tcaggtgccacagcagtagaccagcgctccttgatcaacttggatgtgggctttgtgacc
atgatcttgaagtgctcaattgaaatgtcaaacattagctatgcttggaaagagcttaaa
gagcagctgggtgaagatattgattccaaaataaagggaatggtcttcctcaaaggaaag
ctgggtgtttgctttgatgtccctactgcagcagtaacagaaatacaggaaaaatggcat
gactcacggcgctggcagctctctgtagccaccgagcaaccagagctggaaggaccacgg
gaaggatatcgcggttccagggggccgagggaaggcaatcgaggtttcagggggcagcgg
gaaggaagcagaggaggcttcaggggacggcgggaaggaagcagaggaggcttcagggga
cagcgatcaggaggtggcaacagaaataacagattccaaaacaaaggccagaagcggagt
tttaataaagcattcggtcagtaa
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