Trichechus manatus latirostris (Florida manatee): 101360286
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Entry
101360286 CDS
T05135
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03040
Spliceosome
tmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101360286
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101360286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101360286
04121 Ubiquitin system [BR:
tmu04121
]
101360286
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101360286
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101360286
Spliceosome [BR:
tmu03041
]
Complex B
Other components
Prp19 complex
101360286
Complex C
Prp19-CDC5 complex
101360286
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
U-box type E3
101360286
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
101360286
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_TEP1_C
CFAP251_N
NBCH_WD40
Beta-prop_WDR41
Beta-prop_HPS5
ASA1
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_DCAF4
PAC11
U-box
Beta-prop_RIG_2nd
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
PROPPIN
Beta-prop_Nup120_160
Beta-prop_ACSF4
RMC1_N
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
zf-Nse
Alpha_humulene_synt
TRM82_WD
DUF1830
CCDC13
ATG16
Motif
Other DBs
NCBI-GeneID:
101360286
NCBI-ProteinID:
XP_023598966
UniProt:
A0A2Y9RZJ7
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MRYFEQRVPCQTLLGGVAGKGRGADHGPGYPEGLRRRPRKAGSRGRDRCKGLGASLVPQP
GSLSASTRPRSSAREPSSPGKHVPTLLPSNDAPGCMATRMRVGPQFVSPAARLWTPPHSG
SPGLITPPWSRPQQLLPPRRKYCHPSPGLGLHSPGSDHRYPSLVGEGFLWSRVHFDPTFT
ACLFCAVSNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMSPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatttcgaacagcgcgtcccctgccaaaccctgctgggtggcgttgcgggcaag
ggacgcggcgcggaccatggcccagggtaccccgaggggctcagacggaggccgcgcaag
gctgggtcgcggggcagagatcggtgcaaggggctcggagctagcctcgtgccccagcca
ggcagcctcagtgcctccaccagacctcggagcagcgctcgggaaccctcttctcccggg
aaacacgtgcccacgctgttacctagtaacgacgcccccggttgcatggcaacgagaatg
cgggtgggtccccagtttgtttcccccgccgcgcgactttggacccctccccactcggga
tcaccaggcctcataactccgccctggtcccgcccgcagcagctgctgcctccccgtcgc
aagtactgtcaccccagccccggtctcggcttgcactcaccgggctcagatcaccgctac
ccttcactagtgggtgaggggtttctttggtccagggttcactttgaccccacattcact
gcctgccttttctgtgcagtctccaatgaagtgccagagcacccgtgtgtgtcccctgtc
tctaatcatgtctacgagcggcggctcattgagaagtacatcgcagagaatggcacagac
cccatcaacaaccagcctctgtctgaggagcagctgattgacatcaaagtcgctcaccca
atccggcccaagcctccctcagccaccagcatcccggccattctgaaagccctgcaggat
gagtgggatgcggtcatgctgcacagcttcactctgcgccagcagctgcagacaacccgc
caagagctgtcccacgctctataccagcacgatgccgcctgccgtgtcattgctcgactc
accaaggaagtcactgctgcccgagaagctctggccaccctgaaaccacaggcgggtctc
atcgtgccccaggctgtgccaagctcacagccaagtgttgtgggtgcaggcgagccaatg
gatttgggcgagctggtaggaatgagccctgaaattatccagaagcttcaagacaaggcc
accgtgcttaccacggagcgtaagaagagagggaagactgtgcctgaggaactggtgaag
ccggaagagctcagcaaataccggcaggtggcgtcccatgtgggcttgcacagtgccagc
attccagggatccttgccctggacctctgcccttctgacaccaacaaaatcctcactggt
ggggcagataaaaatgttgttgtcttcgacaagagttctgagcaaatcctggccaccctc
aaaggccataccaagaaagtcaccagtgtggtgttccacccttcccaggacctggtgttt
tcagcttccccagatgccactatcaggatttggtccgtcccgaacgcctcttgtgtccag
gttgttcgggcccatgagagtgctgtgacaggcctcagcctccatgccaccggtgactat
ctcctgagctcctctgatgaccagtattgggccttctctgacatccagacagggcgtgtg
ctcaccaaggtgacagatgagacctctggctgctctcttacctgtgcacagttccacccc
gatggactcatttttggaacaggaaccatggattctcagatcaagatttgggacttgaag
gagcgcaccaatgtggccaacttccctggccactcaggccccatcactagcattgccttc
tccgagaacggctactacctggcaacagcggccgacgactcctctgtcaagctctgggat
ctgcgcaagcttaagaactttaagacgttgcagctggataataactttgaggtgaagtca
ctgatctttgaccagagcggcacctacctggcccttgggggcacagatgtccagatctac
atctgtaaacagtggaccgagattcttcactttacagaacatagcggcctgaccacaggg
gtggcctttggccaccatgccaagttcatcgcttcaacaggcatggacaggagcctcaaa
ttctacagcctctag
DBGET
integrated database retrieval system
