Trichechus manatus latirostris (Florida manatee): 101360302
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Entry
101360302 CDS
T05135
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101360302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101360302
Spliceosome [BR:
tmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101360302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
101360302
NCBI-ProteinID:
XP_004372204
UniProt:
A0A2Y9DCT4
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MTQFRFAGRAADGLIVELGFRWSFAAPEPSMASSRPSSTATKTSKAPDDLVAPVVKKPHI
YYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINISSGEVFEIEEHISERQAEVLAEF
ERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKK
DDEKSKKPKEEYQQTWYHEGPHSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQ
MQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLR
GHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVM
WHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGR
VWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQN
LVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISADGQLIATC
SYDRTFKLWMAE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttccgctttgctgggcgcgcggcggacggtctgattgtagagctcggtttt
cgctggagtttcgcggctccagagcccagcatggcctcctcacgaccctcctccacggca
accaaaacctctaaggcacctgatgacttagttgctcctgttgtgaagaaaccccacatc
tattacggaagtttagaagagaaggagagggagcgtctggccaaaggagagtctggaatt
ttggggaaagaaggacttaaagcaggaatcgaagcaggaaatattaacataagctctgga
gaagtgtttgaaattgaagagcacatcagtgagcgacaggcagaagtattggctgagttt
gagagaaggaagcgagcccggcaaatcaatgtttccacagatgactcagaggtcaaggct
tgtcttagagccttgggggaacccatcacgcttttcggagagggccctgctgaaagaaga
gagagattaagaaatatcctttcagtggttggtactgatgccttaaaaaagaccaaaaaa
gatgatgaaaaatctaagaagcccaaagaagagtatcagcaaacctggtaccatgaagga
ccacacagcctaaaggttgctaggctatggattgctaattattcactgcccagggcaatg
aaacgcttggaagaggctcgtctccataaagagattcctgagacaactaggacctctcag
atgcaagagctgcacaaatcccttcggtctttgaataatttctgcagtcagattggggat
gaccggcctatctcatactgtcactttagtcccaattccaaaatgctggccacagcttgt
tggagtgggctttgcaagctctggtctgttcctgattgcaaccttcttcatactcttcga
ggccacaatacaaatgtaggagcaattgtattccatcccaaatccacagtctctttggac
caaaaagatgtcaacctggcctcttgtgctgctgatggttctgtgaagctttggagcctc
gacagtgatgaaccagtggcagatattgaaggccatactgtacgtgtggcccgagtaatg
tggcatccctcaggacgtttcctgggcaccacctgctatgaccgctcatggcgcttatgg
gatttggaggctcaagaggagatcctgcatcaggagggccacagcatgggtgtgtatgat
attgccttccatcaagatggctctttggctggcactgggggactggatgcatttggtcga
gtttgggacctgcgcacaggacgttgtatcatgttcctagaaggccacctgaaggaaatc
tatggaataaatttttcccccaatggctaccacattgcaactggtagtggtgacaacacg
tgcaaagtgtgggaccttcgacagcgacgctgcgtctacaccatccctgcccatcagaac
ttagtgactggcgtcaaatttgagcctatccatgggaatttcttgctcactggagcctat
gataacacggccaagatctggacccacccaggctggtccccactgaagactctggctggc
catgagggcaaagtgatgggcctcgacatttctgctgatgggcagctcatagccacttgc
tcatatgacaggaccttcaagctctggatggctgaatag
DBGET
integrated database retrieval system
