Trichechus manatus latirostris (Florida manatee): 101360364
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Entry
101360364 CDS
T05135
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101360364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101360364
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101360364
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
101360364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101360364
NCBI-ProteinID:
XP_004368507
UniProt:
A0A2Y9D650
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRSIEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD
LKSLCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTRIPKVRVLEDEEGSKDI
ELFDDPYDCIRLCVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSTGVVTCMR
KVGKGSLDPESIFEMMETGKRVGKVLHTSLQSVLHKEESLGPKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggcgctgagcgaggcggagaaggtgtacatcgtgcacggcgtccaggag
gacctccgtgtggatggccgtggctgcgaggactaccggtccatcgaagtggaaactgat
gtggtgtccaacacaagtgggtctgccagggtcaagctgggccacacggacatcttggta
ggagtgaaagcagaaatgggaacgccgaagctagagaaaccaaacgaaggctacttggag
ttctttgttgactgttcagccaatgccacccctgaatttgaaggccgaggaggtgatgac
cttggcacagagattgcaaacacgctgtaccggatatttaacaataagagcagcgtcgac
ctgaagtccctctgcattagtcctcgggagcactgctggatcctctacgtggatgtgctg
ctgctggaatgtggtggaaacttgtttgatgccatctccattgctgtaaaggctgccctc
ttcaatacaaggataccaaaggttcgcgtcctggaggacgaagaggggtcaaaggacatt
gaacttttcgatgacccgtatgactgcatccggctgtgtgtggagaatgtcccctgcatt
gtcactctgtgcaagatcggctatcggcacgtggtggatgccactcttcaggaggaggcc
tgctccttggccagcttgctagtgtccgtgaccagcacgggggttgtgacgtgcatgagg
aaagtggggaagggcagcctggacccagagagcatcttcgagatgatggagactggcaag
cgagtgggcaaggtgctgcacacctccctgcagagtgtcctgcacaaggaagaaagcctg
gggcccaagagacagaaagtcggattcctgggctga
DBGET
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