Trichechus manatus latirostris (Florida manatee): 101360377
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Entry
101360377 CDS
T05135
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X2
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101360377
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101360377
Spliceosome [BR:
tmu03041
]
Complex C
Other components
Complex C specific factors
101360377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
ABC_tran
Cas3-like_C_2
AAA_19
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
101360377
NCBI-ProteinID:
XP_004370403
UniProt:
A0A2Y9D9Z8
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MAAPVGPVKFWRPGTEGPGVSISEERQSLAENSVTTVVYNAYAALSIEQQRQKLPVFKLR
NHILYLIENCQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRV
AEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHE
RTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEG
RTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEHARE
LARTGMKRHLRVLPMYSGLPSFEQMKVFERVPRSVRKVIVATNVAETSITISGIVYVIDC
GFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFDKLPQSTVP
EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVIPPNQKSQAIRVHRRFAV
EEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE
GDPDPVLRCIVSGFFANAARFHSSGVYRTTRDDHELHIHPASVLYAEKPPRWVVYNEVIQ
TSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRTKVQDL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgtgggaccagtgaagttctggcgacccggtacggaggggccaggtgtc
agcatctctgaagagagacaaagtctagcggaaaactctgtgacaactgttgtttacaat
gcttacgctgccctttctatagagcaacagaggcagaagctgccggttttcaagcttagg
aatcatatattatacttgatagaaaactgtcagacggtggtgattgttggagaaacggga
tgtggaaaaagcacacagatcccacaataccttgcagaagctggctggacagccgaagga
agagttgtgggcgtgacccagcctcgaagagtggctgccgtgacagttgcagggagagta
gctgaggaaagaggtgcagtgctgggccacgaggtgggctactgcatccgctttgacgac
tgcactgacccgctggctacaagaattaagtttctgaccgatggaatgctggtcagggaa
atgatggttgaccctttgttaacaaaatatagtgccatcatgctggatgaagctcatgag
aggaccttgtacaccgacattgccattggcttgttaaaaaagattcagaaaaagcgaggg
gatctccgcttgattgtggcctcagccactctggatgcagagaaatttcgagatttcttt
aatcaaaatgaaaccagtgacccgaccagagatacgtgtgtgatccttacagtggaaggg
cgaacgtttccagtggatatcttttatctgcaaagtcctgttccagattatatcaaatca
actgtggaaactgtgatgaaaattcaccagacagagggcgatggagacatattagcattt
cttactggccaggaagaggtagaaactgttgtgtctatgctaatcgagcacgctcgagag
ctggctcgcactgggatgaagagacacctccgagttctccccatgtattcaggactgcct
tcctttgagcaaatgaaagtgtttgaacgagtgccacgcagtgtcaggaaggtgatagtg
gccaccaatgtggcagaaacctccatcaccatcagcgggattgtatatgtgattgactgc
ggcttcatgaaactccgtgcctacaatcccagaacagctattgaatgcttggtggtggtc
ccggtgtcccaggcctcagccaaccagcgagcagggcgtggtggtcgtaaccgctcaggg
aaatgttatcgactttatacagaggaagcctttgataagttgcctcaatccaccgttcct
gagatgcagcgcagcaatttggcgcctgtcatcctgcagctgaaggcgctgggaattgac
aatgtcctcaggttccacttcatgtcgcctcctccagcacagtcaatggttcaagctttg
gagttactctatgctctgggaggtctggacaaagactgtcggctaactgaaccgcttggc
atgaggatagcggagtttcctttgaatcccatgtttgcaaaaatgctgcttgaatcagga
aattttggctgttctcaggaaatcctaagcattgcggccatgatgcagatccagaatatc
tttgtgatccccccaaaccagaagtcccaggcaattcgagtgcaccgaagatttgctgtg
gaggagggtgatcatctcactatgctcaacgtgtatgaagcattcatcaaacacaataag
aactcgcagtggtgtcaggaacatttcctgaattacaagggccttgtcagagctgcaacg
gtgcgagaacaattgaaaaagcttcttgtcaagttccaagtgcccaagaaatctagtgaa
ggtgatccggatccggttctgaggtgcattgtctcgggattctttgcaaatgctgcgagg
tttcattcttctggagtttataggactacccgtgatgaccacgaattgcacatccaccct
gcatcagtcctctatgcagagaagccgcctcgctgggttgtctacaatgaagttatacaa
acctccaagtattatatgagagatgtgactgctattgaatctgcttggctgttggagctg
gctccacacttttatcaacaaggaacgcacctgtccctgaaagccaaaaggaccaaggtc
caggacttgtga
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