Trichechus manatus latirostris (Florida manatee): 101360405
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Entry
101360405 CDS
T05135
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101360405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101360405
04121 Ubiquitin system [BR:
tmu04121
]
101360405
03036 Chromosome and associated proteins [BR:
tmu03036
]
101360405
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101360405
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101360405
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101360405
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101360405
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101360405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
Ank_KRIT1
NIBRIN_BRCT_II
DUF4901
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
101360405
NCBI-ProteinID:
XP_004376343
UniProt:
A0A2Y9DL88
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MLRDRQPRVRSGNESHPAPAMEPAGRGAWAHSRPALDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSCCVSDCIGTECPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDSKLSDVKE
DTRRTSIFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPQMVKDENAQQASMYEFVS
ASPPVDLSEKAKKTSTKSRKKQKKKTLAEINQKWSLETEKDDDEPDSKEEFKEKLVSFCS
QPSVIASPQLNGEIDLLASDPIAESECFGSLNEISLPLAEQIVSPEVESRDEVVIPEENP
CENDLPSKKSLPLGCEGKRGRHNRLSSPISKSCRSNIQSTTRNLVRQTVVSKDSLPECSS
PPSSKLKVGGKLRRKNSNTLDESISLSPGMSPSALNSPSYRGMLSSPSAMKLSPSSRMAV
KRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ
HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDSEDMKSL
LLLPEKNESSSASHCSVMNTGQRSDRPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDS
TVTHVIVPGDTIQSTLKCMLGILNGCWILKFEWVKACLQRKVCEQEEKYEIPEGPQRSRL
NREQLLPKLFDGCYFYFGGTFKHHPKDNLMKLVTAAGGQILSRKPKPDSDVTQTINTIAY
HARPDSDQRFCTQYIIYEDFSNYRPEKVRQGKVWMAPSSWFIDCVISFELLPLDS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgaccggcagccgagagtccgctccgggaacgagtctcatcccgcgcccgcc
atggagccggcaggtcgcggagcctgggcccacagccgtcccgcgctcgaccggctggag
aaactgctgcgctgctcgcgttgcaccaatattctgagggagcctgtgtgcttaggtgga
tgtgagcacattttctgtagttgttgtgtaagtgactgcattggaaccgaatgtccagtg
tgttatactccagcctggatacaagatgtgaagataaatagacagttggacagcatgatc
cagctttgtagtaagcttcgaaatctgctgcatgacagtaagctttcagatgtgaaagaa
gacacacgtaggacaagtatattcaatgatgcagaaaacaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaagtcagatatgttgtgagtaaagtttcggtgcaaacc
cagcctcaaatggtaaaggatgaaaatgctcagcaggcctcaatgtatgaatttgtttcc
gcaagtccgccagtagatttatctgagaaggctaaaaagacttctacaaaatctaggaaa
aagcaaaaaaagaaaacgttagctgaaatcaaccaaaaatggagtttagagacagaaaaa
gatgatgatgaacctgactccaaagaggaatttaaggaaaagctggtatccttctgcagc
caaccatctgttattgctagccctcagctaaatggtgaaatagacttattagcaagtgac
cctatagcagaatctgaatgtttcggaagcttaaatgaaatctctttaccattggctgag
caaatagtgtctcccgaagttgagagcagggatgaagtagtgattcctgaggagaatccc
tgtgaaaatgatcttccatctaagaaatccttgccattaggttgtgaaggaaaacgtggg
cgtcacaacagactttccagtcccatttctaaaagttgtagaagcaacattcagagcacc
actagaaatcttgtcaggcagacagtcgtctcaaaagactcattgcctgagtgttcttcc
ccaccttcaagcaaacttaaggttggtggcaaattaagaagaaaaaacagtaatacgtta
gatgaatccattagcctttcaccaggtatgtcaccttctgcactgaatagtccaagttac
agaggaatgctgtctagcccctcagcaatgaagctgtcgccgagtagccgtatggctgtg
aaaagaaatcatagaggagagactttgctccatattgcttctattaagggtgacatacct
tctgttgaatacctcttacaaaatggaagtgacccaaatgttaaagaccatgccggatgg
acaccattgcatgaggcctgcaatcacgggcacttgaaggtagtggaattgttgcttcag
cacaaggcgttggtgaacaccaccgggtatcagaatgactcaccacttcatgatgcagcc
aagaatgggcacgtggacatagtcaagctcttactttcctatggagcctccaggaacgct
gttaacatatttggtctgcggcctgtggattatacagacagtgaagatatgaaatcgcta
ttgctgctaccagagaagaatgaatcatcatcagctagccattgctcggttatgaacact
ggtcaacgtagtgataggccacttgttcttataggcagtggcctttcctcagaacaacag
aaaatgctcagtgagcttgcagcaattcttaaggcaaaaaaatgtgctgagtttgatagt
acagtaactcatgtcattgttcctggtgacacaattcaaagtaccctgaaatgtatgctt
gggattctcaatggatgctggatcctaaaatttgaatgggtgaaagcatgtctacaaaga
aaagtatgtgaacaggaagaaaagtatgaaattcctgaaggtcctcagagaagcagactc
aacagagaacagctgttgccaaagctgtttgatggttgctacttctactttgggggaacc
ttcaagcaccatccaaaggacaatctaatgaagctggtcactgcggccggggggcagatc
ctcagtagaaagccaaagccagacagtgatgtgactcaaaccatcaacactattgcatac
cacgccaggcctgattctgatcagcgcttctgcacgcagtatatcatctatgaggatttt
tctaattatcgcccagagaaggttcgtcagggcaaagtctggatggctccttccagctgg
tttatagactgtgtgatatcctttgagttgctccctcttgacagctga
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