Trichechus manatus latirostris (Florida manatee): 101360500
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Entry
101360500 CDS
T05135
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101360500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101360500
03012 Translation factors [BR:
tmu03012
]
101360500
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101360500
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101360500
Translation factors [BR:
tmu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101360500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
AAA_14
PhoH
ATPase
AAA_23
NPHP3_N
DUF6782
Motif
Other DBs
NCBI-GeneID:
101360500
NCBI-ProteinID:
XP_004379234
UniProt:
A0A2Y9DQP4
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MSYDYHQSWSRDGCPRNSGGGFGGSRGGGYGGSRGFGGGGGGGRGGRGRHPGHLKGRQIG
LWYARLQEQKNKEAERQERAVVHMDEHREEQIVQLLNSVQAKNDKDSEAQISWFAPEDHG
YGTEVPAENRPSTEKKLEGQEKKLINQEKRTFRSRDKSYTDRDSEYLLQENEPDVTLDQQ
LLEDLQRKKTDPRYIEMQHFREKLPSYGMQKELVNLIANHQVTVISGETGCGKTTQVTQF
ILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAEACGGGNSTGYQIRLQSRLPRK
QGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVFMTIIKDLLTSRPDLKVV
LMSATLNAEKFSEYFGDCPIIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEYRSPFKRGFM
QGHVNRQEKEAKEAIYEERWAGYVRELRRRYSARTVNVLQMMDDDKVDLNLIAALIRYIV
LEEEDGAILVFLPGWDNISSLHDLLMSQVMFQSDKFLIIPLHSLMPTVNQTQVFKKTPPG
VRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRA
GRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLGRLMDPPS
SEAVWLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAA
SLSFKDPFVIPLGKEKIADARRKELAKDSRSDHLTVVNAFKGWEEARQRGFRYEKDYCWE
YFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRDPQDPESNVNSDNEKIIKAVICAGLYPKV
AKIRPNLGKKRKMVKVYTKSDGLVSIHPKSVNVEQTDFRYNWLIYHLKMRTSSIYLYDCT
EVSPYCLLFFGGDISIQKDDDQETIAVDEWIIFQSPARIAHLVKELRRELDVLLQEKIES
PCPVDWKDTACRDCAVLSAIIDLIKTQEKAMPRKFPPRCRDECFS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagagctggagccgcgatggctgtccccgcaactccggcggg
ggctttggagggagtcgtggagggggctacggagggagccgaggttttggcggcggcgga
gggggtggtcgaggcggccggggccggcatcccgggcacctgaaaggccgccagatcggc
ttgtggtacgcgaggttgcaggagcagaagaacaaggaggcagagaggcaggagagagct
gtagtacacatggatgaacatcgagaagaacaaattgtgcagctgctgaattctgtccaa
gctaagaatgataaagattcagaagcacagatatcctggtttgctcctgaggatcatgga
tatggtactgaagtccctgctgagaacagaccaagcacagagaagaaacttgagggccag
gaaaagaaattgataaaccaagaaaaaaggacctttagaagcagagacaaatcatacaca
gaccgagattctgagtacctcctgcaagaaaatgagccagatgtaaccttagaccaacaa
ctactggaagatttacaacggaagaaaactgaccctcggtatattgaaatgcagcatttc
cgggaaaagctgccttcatatggaatgcaaaaggagttggtgaatctgattgctaatcac
caggtgacagtaataagcggtgaaactggttgtggaaaaaccactcaggtcactcagttc
attttggatgattatatcgaacgaggaaaaggatctgcgtgcaggatcgtgtgtactcag
ccaagaaggatcagtgccatctcagttgcagagcgagtggctgcagaaagggcagaggct
tgtggcggcggtaacagtactggataccagattcgtctccagagtcggctgccaaggaag
cagggctctatcttatactgtacaacagggatcatccttcagtggctgcagtcagacccg
catttatccagtgtcagtcacatcgtcctggatgaaatccacgagagaaatctacagtca
gatgtcttcatgacgattattaaagatcttctcacgtctcgacctgacctgaaggtggta
ctgatgagtgccacactgaatgctgagaaattttcagaatattttggtgactgtccaatc
atacatatacctggttttacttttccggttgtggagtatcttttggaagatataattgaa
aagataagatatgttccagaacaaaaagaatacagatccccgtttaagaggggtttcatg
caagggcacgtaaatagacaggaaaaagaagccaaagaagccatctatgaagaacgctgg
gcaggttacgtaagggaactgcgaagaaggtattctgcaaggactgtaaatgttttacaa
atgatggatgatgataaagttgatctgaacttgattgctgcccttatccgatacattgtt
ttggaagaagaggatggtgcaatactggtgtttctgccaggctgggacaatatcagcagt
ttacacgatctcttgatgtcacaagtgatgtttcagtcagataagtttcttattatacct
ttacattcgctgatgcctacagttaaccagacacaggtgtttaagaaaacccctcctggt
gttcggaaaatagtgattgctaccaacattgcggagactagcattaccatagatgacgta
gtttatgtgatagatggagggaaaataaaagagacgcactttgacactcagaacaacatc
agcaccatgtcggctgagtgggtcagtaaagccaacgccaaacagaggaagggccgggct
ggcagagttcaacctggtcattgctatcatctctacaatggtctcagagcaagcctacta
gatgactatcaactgccagaaattttgagaactcctttggaagaattatgtttacaaata
aagattttaaagctaggtggaattgcttattttctggggagattaatggatccaccatca
agtgaggcagtgtggctctccataaaacacctgatggaactgaatgctttggataaacaa
gaagagttgacacctcttggagtccacttagcacgattaccggttgagccacatattggc
aaaatgattctctttggagctctgttctgttgcttagacccagtactcactattgctgct
agtctcagcttcaaagatccctttgtcattccgttgggaaaggaaaagatcgcagatgca
agaagaaaagaattggcaaaggattctagaagtgaccacctgacagtcgtgaatgcattt
aagggctgggaagaagctaggcaacgtggtttcagatatgaaaaggactattgctgggaa
tattttctgtcttcaaacaccctgcagatgctgcacaacatgaaggggcagtttgccgag
cacctccttggagcgggatttgtaagcagtagggatcctcaggacccagagtctaacgta
aattcagataatgagaagataattaaagctgttatctgtgctggtttataccccaaagtt
gctaaaatccgaccaaatttgggtaaaaaaagaaaaatggttaaagtgtatacaaaaagt
gatggattagtttccattcatcctaaatctgttaatgtggaacagacagactttcgctac
aactggcttatctatcatctgaagatgagaacaagcagcatatacttgtatgactgcaca
gaggtttccccgtattgtctgttgttctttggaggtgatatttccatccagaaggatgat
gatcaagaaactattgctgtagatgaatggattatctttcagtctccagcaagaattgcc
catcttgttaaggaattaagaagggaactggatgtccttctgcaagagaagatcgaaagt
ccgtgtcctgtagactggaaggacactgcgtgcagagactgtgcagtgctatctgccatc
atagacttgatcaaaacgcaggaaaaggcaatgcccaggaagtttccaccacgctgccgg
gatgagtgtttcagctga
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