Trichechus manatus latirostris (Florida manatee): 101360688
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Entry
101360688 CDS
T05135
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101360688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101360688
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101360688
mRNA degradation factors
5'-3' decay
Decapping complex
101360688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
101360688
NCBI-ProteinID:
XP_004381269
UniProt:
A0A2Y9DUG8
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All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MAAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVY
TRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQR
IAELMKNLTQYEQLKAHQGAGAGVSPMILNSGEGKEVDILRMLTKAKDEYTKCKTCSEPK
QITSSSAIYDNPYLIKPIPVKPSENQQQRIPQPRQTLDPEPQHLSLMALFGKQDKATCRE
IVEPPQTFHQQQQQEKLPVRQGVVRSLSYEEPKRHSPPLEKQLCPAIQKLMARSADLQPL
SELPENRPCENGSPRSAREIFPRLVQPACSHNIGMSHCVQSASRAQSLLEKLQSAPGAEM
KYDTSTPGPSSSAAPNFSRTLTAATPVAPGKALAQPQLVYFNGSLPPETLGHQAPGKEQS
AFPRTTLPLSCNQTSSCGVVSPQELLRKLQIVQQEQQLHASNRPALAAKFPAVTQSSRTA
KPLESWIDKTSSTERQAPLFQVISPQRIPATVTPSLLMSPMVFTQSTSAPSKERDSGLLP
LGSQEPTAASTSLFLPLKNPEPPAITSSPLTKLQLQEALLYLIQNDDNFLNIIYEAYLFS
VTQAAVKKTM
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggtggcctggtcgggaaggggcgcgacatcagcctagcggccctgcag
cgccacgacccctatatcaaccgcatcgtggacgtggccagccaggtggctctgtacact
ttcggccatcgggccaacgagtgggagaagactgatgtggaaggaaccctatttgtttat
acaaggtctgcttctccaaagcatggattcaccattatgaataggctgagcatggaaaat
aggacagaacccattactaaagacctggatttccaactccaggacccttttcttctctac
agaaatgccagattgtccatttatggaatttggttttatgataaggaagaatgccaaaga
attgcagagcttatgaaaaacctaactcaatatgaacagttgaaagcccatcaaggagca
ggagcaggagtctccccaatgatcctcaattcaggagagggcaaggaagtagatatctta
cgaatgctcaccaaggccaaagatgaatacacaaagtgtaaaacctgttctgagccaaaa
cagataaccagttcatctgccatctatgacaacccctatctcatcaagccaattccagtg
aaacccagtgaaaaccagcaacagcgcatacctcagcctagacagaccttggaccctgaa
ccccaacacttatccctgatggctctctttgggaaacaggacaaagcaacatgtcgggaa
attgtggagcctccacagaccttccaccagcagcagcagcaagagaaacttccagttcgg
cagggggttgtacggtccctgtcctatgaggaacccaaaagacactcaccccctttggag
aagcagctctgtccggccattcagaaactcatggccaggagcgcagacctccagccattg
tcagagctgcccgaaaaccggccctgtgaaaatggcagtccccgttctgccagggaaatt
tttcccagacttgtccagccagcatgttcccataacattgggatgtctcattgtgtacaa
agtgcttccagagctcagagcctgttagagaagcttcagagtgccccaggggcagaaatg
aagtatgataccagtacaccaggaccttccagctcagctgccccaaacttcagcagaact
ctcactgctgccacccctgtagctccaggaaaggctttggctcagccacaactggtatat
ttcaatggctcccttccacctgagacactaggacatcaggctcctgggaaagaacagtcc
gcattcccaagaacaacacttcctctgtcctgcaatcaaactagcagttgtggagtggtc
tcccctcaggagttactgagaaagctccagatcgtgcagcaggagcaacagctgcatgcc
tccaaccgcccagccttggcagctaagtttcctgcggtaactcagagctctaggacggca
aaacccttggaatcctggatcgacaagacatccagcacagaaaggcaggctcctcttttt
caggttatctcacctcagcgcatccctgctacagtgactccttctctgctcatgtccccc
atggtgttcacgcagtccacctcggccccatcaaaggagagggacagtgggctcttgccc
ttgggaagccaagaaccgactgctgcctccaccagcctcttcctgcctctgaagaaccca
gagcctcccgcgatcaccagcagccctcttaccaagctgcaacttcaggaagcactactg
tacctcatccagaatgacgacaacttcttaaatataatctatgaagcttatctcttcagt
gtgacacaagcagccgtgaaaaagactatgtga
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