Trichechus manatus latirostris (Florida manatee): 101360733
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Entry
101360733 CDS
T05135
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03440
Homologous recombination
tmu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101360733
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101360733
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tmu01002
]
101360733
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101360733
03036 Chromosome and associated proteins [BR:
tmu03036
]
101360733
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101360733
Peptidases and inhibitors [BR:
tmu01002
]
Metallo peptidases
Family M67
101360733
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101360733
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
101360733
BRISC complex
101360733
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
101360733
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
101360733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
DUF2804
Motif
Other DBs
NCBI-GeneID:
101360733
NCBI-ProteinID:
XP_004390933
UniProt:
A0A2Y9ECP7
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MAVQVVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVA
EKVDTVKIIHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHS
HPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSE
SPHGPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHVTIGKVCLESAVELPKILCQEE
QDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQQ
EKEELMQELSSLE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggtggtgcaggcggtccatctggagtccgacgctttcctagtctgtctc
aaccatgctctgagcacagaaaaggaggaggtgatggggctgtgtatcggggagttgaat
gatgacacaaggagtgactcaaaatttgcatatactggaactgaaatgcgaacagttgct
gaaaaggttgacactgtgaagattattcacattcattctgtcatcatcttgcgacgttcc
gataagaggaaggatcgagtggaaatttctccagagcaactgtctgcggcttcaacagag
gcagagaggttggctgaactaacaggtcgccccatgagagttgtgggctggtatcattcc
catcctcatataactgtttggccttcccatgttgatgttcgcacacaagccatgtaccag
atgatggatcaaggctttgtaggactgattttttcctgtttcatagaagataaaaacaca
aagactggccgagtgctgtacacttgcttccaatccatacaagcccaaaagagctcagag
tcccctcatggtccacgagacttctggagctccagccagcacatctccattgagggccag
aaggaagaggaaaggtatgagagaatcgaaatcccaatccatatcgtacctcatgtcacc
attgggaaagtgtgccttgaatcagcagtagaactgcccaagattctgtgccaggaggag
caggatgcatataggaggatccacagccttacgcatctggactcagtaaccaagatccat
aatggctcagtgtttaccaagaacctatgcagccagatgtcagcggtcagcgggcctctc
ctgcagtggttggaggacagattggagcaaaaccaacagcatttgcaggagttgcaacaa
gaaaaggaagagctcatgcaagaactttcttccctagaataa
DBGET
integrated database retrieval system
