Trichechus manatus latirostris (Florida manatee): 101360779
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Entry
101360779 CDS
T05135
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu05016
Huntington disease
tmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101360779
05022 Pathways of neurodegeneration - multiple diseases
101360779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101360779
04131 Membrane trafficking [BR:
tmu04131
]
101360779
03029 Mitochondrial biogenesis [BR:
tmu03029
]
101360779
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101360779
Membrane trafficking [BR:
tmu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101360779
Mitochondrial biogenesis [BR:
tmu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
101360779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EZ
HEAT_EF3_N
DUF2357
Motif
Other DBs
NCBI-GeneID:
101360779
NCBI-ProteinID:
XP_023593769
UniProt:
A0A2Y9RPA7
LinkDB
All DBs
Position
Unknown
AA seq
3075 aa
AA seq
DB search
PPPLGLAVAEEPLHRPKKELFNTKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELF
LLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAE
LAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPKIMASFGNFANDNEIKVLL
KAFIANLKSGSPTIRRTAAGSAVSVCQHSRRMQYFYSWLLNVLLGLLVPVEDEHPTLLIL
GVLLTLRYLVPLLQQQVKDMSLKGSFGVTRKEMEVSPSTEQLVQVYELTLHYTQHPDHNV
VTGALELLQQIFRTPPPELLQALTTAGGLGRLTAARDEPSCRSRSGSIVELIAGGGSSCS
PVLSRRQKGKVLQGEEEGLEDDSESRSDVSSSTFAASVKGEITGELAASSGVSTPGSSSS
AADSTGHDIITEQPRSQHTLQSDSVALASCDLASAATEGDEEDILSPSSSQISAIPSDPA
MDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYLGMQTGQLQDDDEDA
AAALPDEATDAFRSSPVALQQAHLLTNMGYSRQSSDSSVDKFTSREEGAEPGDQESKPCR
VKGDVGQSTDDDAAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALAVSCVSAAVAL
HPESFFSKLYKVPLDATEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLVYSILSRARF
HVGDWLGALRSLTGNTFSLADCIPLLQKTLKDESSVTCKLACSAVRHCVTSLCGSSYSDL
GLQLIIDVLALRSSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGLLKLQE
RVLNDVAIYLLGDEDPRVRHVAAASLMRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLL
MHETQPPSHFSVSTITRVYRGYNLVPSITDVTLENNLSRVIAAVSHELITSTTRALTFGC
CEALCLLSTAFPVCVWSLGWHCGVPPLSASDESRKSCTVGMATMVLTLLSSAWFPLDLSA
HQDALTLAGNLLAASAPKSLRSSWTAEEEANPAATKQEEVWPALSDRTLVPMVEQLFSHL
LKVINICAHVLDDVAPGPAVKAALPSLTNPPSLSPIRRKGKEKEAGEQASAPLSPKKGTE
AGPASRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSSEKFGG
FLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREPMMATVCVQQLLKTLFGTNLA
SQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEP
DASGWFDVLQKVSSQLKTNLTGVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQ
KQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRQSEAIIPNIFFFLVLLS
YERYHSKQIVGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELE
TQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMLAKQQMHI
DSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPSTMASVSTVQLWISGILAILRVLIS
QSTEDIVLSRIQELSFSPYLISCPVINRLREGGSNSTPEEHSEGRETKNLPEETFSRFLL
QLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLLTS
DSSDGSFYALEGLNSHVRAMIPTHPSLVLLWCQLLLLANYTDYRWWAEVQQTPKRCSLSS
TKLLSPQTLGEEDDSDLASKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQ
DLISLSQEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTTLRKTLQCLEGIHLSQS
GAVLTLYVDRLLCTPLRVLARRVDTLACRRVEMLLAANAQSSMSQLPLEELNRIQEYLQS
SGLAQRHQRLYSLLDRFRLSTVPESPSPSPPVTSHPLDRDGQMSLETVSPDKDWYIRLVK
SQCWTRSDSALLEGAELVHRIPPSELGAFMMNPEFNLSLLAPCLSLGMSEISGGHRSHLF
ETARLVTLERMSSIVQQLPTTHQVFQPFLPAESSAYWSKLNDLFGDTALYHSMTTLARAL
AQYLMVLSILPGHLHLPTDKEQDAVKFVVMILEALSWHLIHEQMPLSLDLQAGLDCCCLA
LQRQGLWLVVSSPEFVSHACSLIHCVRFILEAIAVQPGDQLLSPERRTSAPKAIREDRVD
SNTPHRQSITTACEMVAEMVEALQSVLALGHKRNSGMPAFLTSVLKNIVISLARLPLVNS
YTRVPPLVWKLGWSPKPGGDFGTALPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEET
WATLLGVLVTQPLAMEQEESQPEEDTERTQINVLAVQAITSLVLSAMTVPMAGNPAVSCL
EQQPRNKPLKALDTRFGRKLSVIRGIVEQEVQAMVSKRENIATHHSYQAWDPVPSLSPAT
TGALISHDRLLLQANPERELGNMSYKLGQVSIHSVWLGNNITPLREEEWGEEEEEEVDVP
APSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWVLPSSSARRTPVILISEVVRSLLVV
SDLFTERSQFEMMYATLTELRRVHPSEDEILIQYLVPATCKAAAVLGMDKAVAEPVSRLL
ESALRSSHLPSRIGALHGMLYVLECDLLDDTAKQLIPVISDYLLSNLKGVAHCVNVHSQQ
HVLLMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSAVFHCVLRGLERLLL
SEQLSRLDAESLVKLSVDRVSVHSPHRAMAALGLMLTCMYTGKEKVSPGRSTDPTPAAPD
SESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQP
YPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSASTSP
WVSAALPHVISRMGKLEPVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGSPYH
RLLTCLRNVHQGATG
NT seq
9228 nt
NT seq
+upstream
nt +downstream
nt
ccgccgccgctcggcctggccgtggccgaggagccgctgcaccgaccaaagaaagaactc
ttcaacaccaagaaagaccgtgtgaatcactgtctgacgatatgtgaaaacatagtggcg
cagtctctcagaaattctccagaatttcagaaacttctgggcatcgctatggaactcttt
ctgctgtgcagtgatgatgcggagtctgatgtccggatggtggccgatgaatgcctcaac
aaagttataaaagctttgatggattctaacctcccgaggttgcagttagagctctataag
gaaattaaaaagaacggtgctcctcgaagtctgcgcgctgccctctggaggtttgcggag
ctggctcacctggttcggccgcagaaatgcaggccttacctggtaaacctgttgccttgc
ctgactcgaataagcaagagacccgaggagtctgttcaggagaccttggctgcagctata
cccaaaattatggcttcctttggcaattttgcaaacgacaatgaaattaaggttctgctg
aaggcgtttatcgcgaacctgaagtccggctccccgactatccggcgaacggctgctggg
tcggcggtgagcgtctgccagcactccaggaggatgcagtacttctacagctggctgctg
aatgtgctcttaggcttgctggttcctgtggaggacgagcaccccaccctcctcatcctg
ggagtgctgctcaccctgaggtacctggtgcccttgctgcagcagcaggtcaaggacatg
agcctgaaaggcagctttggggtgacacgcaaagaaatggaagtctctccttccacggag
cagcttgtccaggtttatgagctgactctgcattacacgcaacacccggaccacaacgtt
gtcacgggggcgctggagctgctgcagcagattttcaggacccctcccccggagctcctc
caggctctgaccacggcaggcggcctcgggcggctcactgcggccagggacgagccgagc
tgcaggagccgcagcgggagtatcgtggagctcatagctggagggggttcttcatgcagc
cctgtcctttcaagaagacaaaaaggtaaagtgctccaaggggaggaggaaggcttggaa
gacgactctgaatcgcggtcggacgtcagcagctccacctttgcagcctctgtgaagggt
gagattactggtgagttggctgcttcttcgggggtttcgactcctgggtcttcgagctca
gctgctgactccacaggtcacgatatcatcactgagcagccccggtcacagcacaccctg
cagtcggactctgtggccctggccagctgtgacctggcaagtgctgccaccgagggggac
gaggaggacatcctgagccccagctccagccagatcagcgccatcccgtccgaccccgcc
atggacttaaacgatgggacccaggcctcctccccaatcagcgacagctcccagaccacc
accgaagggcccgactcggccgtgaccccttcagacagttctgaaattgtgttagatggc
gcggacagccagtacttgggaatgcagactggacagctgcaggacgacgacgaggacgca
gccgccgctcttcccgacgaggccacagatgccttcagaagctctcctgtcgcccttcag
caagcgcatttactgacgaacatggggtacagcaggcagtcttctgacagcagtgtggat
aaattcacatcaagagaggaaggtgctgagccaggtgatcaggaaagcaagccttgcaga
gtcaaaggtgacgtaggacagtctactgatgatgatgctgctcctcttgtccactgtgtc
cgccttttatcagcttcgtttctgctaactggggagaaaaatgcactggttccagatcgg
gatgtgagggtgagcgtgaaggcgctggcggtcagctgtgtcagtgcagcggtggccctt
catcctgagtccttcttcagcaaactttacaaagtacctctcgatgccacggaatatccc
gaggagcagtatgtctcggacatcttgaactacatcgatcatggagacccgcaggtccga
ggggccactgccatcctctgtgggacccttgtctactccatcctcagccgagcccgcttc
cacgtgggcgactggctgggcgccctgcgaagcctgacaggaaatacgttttctctggcg
gactgcattcctttgctgcagaaaaccttgaaagacgagtcttccgttacttgcaagttg
gcttgctcagctgtgcggcactgcgtcacgagcctgtgcggcagcagctacagtgacctg
gggctgcagctgatcatcgatgtgcttgccctgaggagcagctcctactggctggtgagg
acggagcttttggaaacccttgcagagattgacttcaggttggtgagcttcttggaggca
aaagcagaaaacttacacagaggggctcatcattacacagggcttttaaaactgcaagaa
cgagtgctgaacgacgttgccatctatttgctgggagatgaagaccccagggtgcggcat
gttgccgcagcatcactgatgaggcttgtcccaaagctgttctataagtgtgaccaagga
caggcggatccagtggtggctgtggcgagagatcagagcagcgtgtacctgaagctcctg
atgcatgagacgcagcctccgtctcacttctccgtcagcaccataaccagggtatataga
ggctataacttagtaccaagcatcacagatgtcactctggaaaacaacctttcgagggtt
attgctgcggtttcccacgaactgatcacgtcgaccacacgagcgctcacgtttggatgc
tgtgaagctttgtgtcttctatcaactgcctttccagtctgcgtttggagtttgggttgg
cattgcggagtccccccgctgagtgcctcagacgagtccaggaaaagctgtaccgtgggg
atggccacgatggtcctcaccctgctctcctcagcctggttccccttggatctttccgcc
caccaggatgccctgactttagctgggaacttgcttgcagccagtgctcccaaatctctg
agaagctcatggaccgccgaagaagaagccaacccagcagccaccaaacaggaagaggtc
tggccagctctcagtgaccgaaccctggtgcccatggtggaacagctcttctctcacctg
ctaaaggtgatcaatatctgcgctcacgtcctggacgatgtggctcctggaccagcagta
aaggcagccttgccttctctgaccaaccccccttctctaagtccaatccgacggaaggga
aaggagaaagaagcaggagagcaggcctcggcgccattgagcccaaagaagggcacagaa
gctggtccagcttctagacaatctgatacctcagggcctgttacaacaagtaagtcctcg
tcactaggaagtttctatcaccttccttcgtacctcaaattgcatgacgtcctgaaggct
actcacgccaactacaaggtcaccttggatctccagaacagcagtgagaagttcgggggg
tttctgcgctctgccttggatgttctttcacagattctagaactggcaactctgcaggac
attgggaagtgtgttgaagagatcctcgggtacctgaaatcctgctttaatcgagagccg
atgatggcgacggtctgtgttcagcagttgttgaagactctctttgggacaaacttggcg
tcccagttcgatggcttgtcttccaaccccagcaagtctcaaggccgcgcccagcgccta
ggctcctccagtgtgcggcctggcctgtaccattactgcttcatggcaccgtacacccac
ttcacccaggccttggcggatgccagtctcagaaacatggtgcaggcagagcaggagccc
gacgcttcagggtggttcgatgtgctccagaaagtgtcttcccaattgaaaacaaacctc
acaggcgtcacaaagaaccgtgcagataagaatgctattcataatcacattcgcttattt
gagccgcttgttataaaagctttaaaacagtacaccacaacaacgtctgtgcaattgcag
aagcaggttttagacctgctggcgcagctggttcagttacgggtcaattactgtcttctg
gattcagatcaggtgttcattggatttgtgctaaaacagtttgagtacatcgaagtgggc
cagttcaggcaatcggaggcgattattccaaacatctttttcttcttggtcttactgtct
tatgaacgctatcactcaaagcagatcgttgggattcccaaaatcattcagctctgtgat
ggcatcatggccagtgggaggaaggccgtgacacatgccatcccggccctacagcccatc
gtgcacgacctctttgtgttgagagggacaaataaagccgacgcagggaaggagctggag
acccagaaggaggtggtggtgtctatgctgctgagactcatccagtaccaccaggtgctg
gagatgtttatcctcgtcctgcagcagtgccacaaggagaacgaagacaagtggaagcgg
ctgtctcgacagatcgcggacgtcatcctcccgatgctggcgaaacagcagatgcacatt
gattctcacgaagcccttggagtgctgaacactttatttgaaattctggccccctcgtcc
ctccgtcctgtggacatgctcttacgaagcatgttcgtcactccaagtacaatggcatct
gtgagcaccgttcagctgtggatatcgggaatcctagccattttgagggttctcatttcc
cagtcaacggaagacatcgttctttctcgcattcaggagctctccttctccccgtattta
atctcctgtccggtaattaacaggttgagagaagggggcagtaattcaacaccggaagaa
cacagtgaagggagagaaacgaagaatttgccagaagaaaccttttccagatttctgctc
cagttggttggcattcttttagaggacattgtcacgaagcagctgaaagtggaaatgagt
gaacagcaacacactttctattgccaagagctgggcacgctgctgatgtgtctgatccac
atcttcaagtctggaatgttccggaggatcacggcagccgccactagactcctcaccagt
gacagctcggacggcagcttctacgccctggagggcctgaactcgcatgtgcgcgccatg
atccccacccacccgtccctcgtgttgctctggtgccagctcctgctgctggccaactac
accgactaccgctggtgggccgaggtgcagcagacccccaagagatgtagtctttccagc
accaagttactcagccctcagacgctgggagaggaggacgattctgacctggcatccaag
ctggggatgtgcaatagagagatagtgagaagaggggcgctcattctcttctgtgattat
gtttgtcagaacctgcatgactcggagcacttgacatggctcattgtgaaccacattcag
gatctcatcagcctgtcccaagagcctccggttcaggacttcattagtgctgtccaccgg
aattctgctgccagtgggctcttcatccaggcgattcagtctcgctgcgaaaacctttca
actccgaccacgctgaggaagacgctgcagtgcctggagggcatccacctcagccagtca
ggtgccgtgctgacgctgtatgtggaccggctgctgtgcaccccgctccgcgtgctggct
cgcagggtcgacacccttgcctgtcgccgtgtggaaatgcttctggctgcaaacgcacag
agcagcatgtctcagctgccactggaagaactgaacaggattcaggagtaccttcagagc
agcgggctagcgcagagacaccaaaggctctactccctgctggacaggttccgtctctcc
accgtccctgagtcaccaagcccctcccctcccgtcacttcccacccgctggacagggat
gggcagatgtccctggaaacagtgagcccagataaagactggtacatacgccttgtcaag
tcccagtgttggaccaggtcagattccgcgctgctggaaggcgcagagctggtgcatcgg
atccctcccagcgagctgggtgcattcatgatgaacccggagttcaacctaagcctgttg
gccccgtgcttaagcctcggcatgagtgaaatttctgggggccacaggagccacctcttt
gaaacggcccgcctggtgactctggagcgtatgagcagcatcgtccagcagctccccacc
acccatcaggtgttccagcctttcctcccagccgagtcctcagcctactggagcaagctg
aatgacctatttggggacacagcgctgtaccactcgatgaccacgttggcccgggccctg
gcgcagtacctgatggtgctctccatactgcccggccacctgcacctccccaccgacaag
gagcaggatgctgtcaagtttgtggtgatgatactcgaggccctgtcatggcatttaatc
cacgagcagatgccgctgagcctggacctgcaggccggcctggactgctgctgcttggcg
ctgcagcggcagggcctctggcttgtggtctcctccccagagttcgtgagccacgcctgc
tccctcatccactgcgtgcgcttcatcctcgaggccattgcagtgcagcctggggaccag
cttctaagcccagagaggaggaccagtgcgccaaaggccatcagagaggacagagtggac
tctaacaccccacatcggcagtctatcaccacagcctgtgagatggtggcagaaatggtg
gaggctttgcagtcggtgctggccctgggccataaaaggaacagtggcatgccggccttc
ctcacgtcagtgctcaagaacatcgtcatcagtctggcccgcctacccctcgtcaacagc
tacacacgggtcccgcccttggtgtggaagctcgggtggtcacccaaacccggaggggac
tttggcacagcacttcctgagatccctgtggagtttcttcaagagaaggaggtcttcaag
gagttcatctatcgaatcaatacactagggtggaccagccgcacccagtttgaggaaacg
tgggccaccctcctcggtgtcctggtgacgcagcccctcgccatggagcaggaggagagc
caaccagaagaagacacagagaggacccagatcaacgtcctggccgtgcaggccatcacc
tccctggtgctgagcgccatgactgtgcctatggccggcaaccctgccgtgagctgcttg
gagcaacagccccggaacaagccgctgaaagcgctcgacaccaggtttgggaggaagctg
agtgttatcagaggaattgtagagcaggaagttcaagcaatggtttccaagagagagaat
atcgccacccatcattcataccaagcgtgggaccctgtcccttctctgtctccagctact
acaggtgccctcatcagccatgacaggctcctgctccaggccaaccccgagcgggagctg
gggaacatgagttacaagctcggccaggtttcaatacactctgtgtggctgggaaacaac
atcacacccctgcgagaagaggagtggggtgaggaggaggaggaggaggttgatgtgccc
gcgccttcctcaccacccacatcgcctgtcaactccaggaaacaccgggctggggtggac
atccattcctgctcacagtttttgcttgaactgtacagtcgctgggtcctgccatcaagc
tcagccaggaggactcctgtcattctgatcagtgaagtggttcgatctcttcttgtggtc
tcagacttgttcactgagcgcagccagtttgagatgatgtatgcgacgctgacggagctg
cggagggtacacccttcagaagatgagattctcattcagtatctggtgccggccacgtgc
aaagcagctgctgtcctgggcatggacaaggccgtggccgagccagtcagccgtctgctg
gagagcgccctccggagcagccacctgcccagccggatcggcgccctgcacggcatgctc
tacgtgctcgagtgtgacctgctggacgataccgccaagcagctcatccccgtcatcagc
gactacctgctctccaacctcaagggcgtcgcccactgcgtgaatgtccatagccagcag
catgtcctgctgatgtgtgccaccgccttctacctgatcgagaactaccccctggacgtg
gggcccgagttttctgcctccatcatacagatgtgcggcgtgatgctatcgggcagcgag
gagtccaccccgtcggccgtgttccactgcgtcctgcggggcctggagcgtctcctcctc
tcggagcagctctcgcggctggatgctgagtccttggtcaagctgagcgtcgaccgtgtc
agtgtgcacagcccgcatcgcgccatggccgccctgggcctgatgctcacctgcatgtac
acagggaaggagaaagtcagcccggggaggtcgacagatcccacccccgcggccccggac
agtgagtcggtgatcgtggccatggagcgggtgtctgtccttttcgacaggatccggaag
ggctttccctgtgaagccagagtggtggcccggatcctcccgcagtttctggacgacttc
ttcccaccccaggacgtcatgaacaaggtcatcggggagtttctatccaaccagcaaccg
tacccccagttcatggccactgtcgtgtacaaggtgttccagacgctgcacagcacgggg
cagtcatccatggtacgggactgggtgatgctctcgctctccaacttcacgcagcggacg
cctgtggccatggccgtgtggagcctctcctgcttcttcgtcagcgcctccaccagcccc
tgggtgtcagcggccctcccgcacgtcatcagcaggatgggcaagctggagccagtggat
gtgaacctcttctgcctggtcgccaccgacttttatcgacaccagatagaggaggagctc
gaccgcagggccttccagtctgtgttcgaggtggtagcagccccgggaagcccgtaccac
cggctgctgacgtgtttgcggaacgtccaccagggcgccacgggctga
DBGET
integrated database retrieval system
