Trichechus manatus latirostris (Florida manatee): 101361207
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Entry
101361207 CDS
T05135
Name
(RefSeq) protein strawberry notch homolog 1 isoform X2
KO
K26273
protein strawberry notch
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmu03036
]
101361207
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101361207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101361207
NCBI-ProteinID:
XP_004385043
UniProt:
A0A2Y9E1B4
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLATPTPTPPVHQSVPLGALELGLETEAA
LPVKQEPETVPTPALLNVRQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITLT
KFIQTTANTRPSVSAPAVRNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVAT
AATDVSNGTVKKDSANKEVARIWINDMKMNFSSTVKVPVGKEEDEPEEEDEEEMGHAETY
AEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITYAA
QQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERD
LRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLL
HWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEP
RNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVT
FKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAAELIDAEQRMKKSMWGQFWSAHQRFFK
YLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQ
SLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKIKKRKGEEITREAKKARKV
GGLTGSSSDDSGSDSDASDNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIRKD
HKKNKDKKKKKSIDPDSIQSALLASGLGSKRPSFSSAPVISPAPNSASANSNTNSNSLIT
SQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDG
SISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHM
TLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGD
RRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIGVG
LINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGRYD
MGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGPDD
GFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYSDLKKKYKKVASDDAL
MHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLA
SVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQRKQLWQQHH
PQSITNLSNA
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagggcaagatttattgctggctgctttgagtgagagtggaattagtcca
aatgacctctttgatattgatggtggagatgcagggcttgcaactccaacgcctacccct
ccagttcatcagtcagtgccacttggtgcgttagaactcggtttggagactgaagccgca
cttcctgttaaacaagagccagaaacggtacctacgccagcactattaaacgttaggcag
cctccgtctactacaacatttgtgctgaatcagataaatcaacttccaaccttggggtct
acaattgtaatgactaaaacaccacctgtaacaactaataggcaaaccatcacgttgaca
aagtttatccagacaactgcaaacacacgcccttcagtctctgcaccagcagttcgaaat
gccatgacctctgcaccttcaaaagaccaggttcagctgaaagatctgctaaaaaataat
agtctgaatgaactcatgaaactaaagccacctgctaatattgctcaaccagttgcaaca
gcagctactgatgtaagcaatggtacagtaaagaaagattctgctaataaagaagtagca
agaatatggataaacgatatgaaaatgaatttttcctcaactgtgaaggtccctgttggg
aaagaggaagatgaaccagaggaagaagacgaagaagaaatgggtcatgcagaaacctat
gcagagtatatgccaataaaattaaaaattggcctacgtcacccagatgctgtagtggaa
actagctctttatccagtgttactcctcctgatgtatggtacaaaacatccatttctgaa
gaaaccattgataatggctggttatcagcattacaacttgaagcaattacttatgcagcc
cagcaacatgaaacattcctacctaatggagatcgtgctggcttcttaataggtgatggt
gctggtgtaggaaaagggaggacgattgcaggaatcatttatgagaattacttgttgagt
agaaaaagagcgctgtggttcagtgtttcaaatgatttgaagtatgatgctgaaagagat
ttgagggatattggagcaaaaaacattttggtccattcgttaaataagtttaaatacgga
aaaatttcctccaaacataatggaagtgtgaaaaaaggtgttatttttgctacctattct
tcccttattggagaaagtcagtctggcggtaaatacaaaactagattaaaacaacttcta
cattggtgtggtgatgactttgatggagtgatagtgtttgatgaatgtcataaagcaaaa
aacttatgtcctgttggttcttcaaagccaactaagacaggcttagcagttctagagctt
cagaacaagttgccaaaagccagagttgtttacgctagtgccaccggtgcttctgagcca
cgcaacatggcctatatgaaccgtcttggaatatggggtgagggaactccgtttagagag
ttcagtgattttatccaagcggtcgagcggagaggtgttggtgccatggagatagttgct
atggatatgaagcttagagggatgtacattgctcgacagctgagctttactggagtgacc
ttcaaaattgaggaagttcttctttctcagagctatgtaaaaatgtataacaaagcagtc
aagctgtgggtgattgccagagagcgatttcagcaagccgcagaactgattgacgccgaa
cagcgaatgaagaaatccatgtggggccagttctggtctgcgcaccagagatttttcaaa
tacttgtgcatagcatccaaagttaaaagggttgtgcaactagctcgagaggagatcaag
aatggaaaatgtgtggtaattggcctgcagtctacaggagaagctaggactttagaagcc
ttggaagagggcgggggagagctgaatgattttgtttcaactgccaaaggagtgttacag
tcactcattgagaagcacttccctgctccagacaggaaaaaactttatagtttgctagga
atagatttgacagctccaagtaacaacagttcaccaagagacagtccttgtaaagaaaat
aaaataaagaagcggaaaggtgaagaaataactcgagaagccaagaaagcacgaaaagta
ggtggccttactggcagcagttctgatgatagtggcagtgactctgatgcctctgataat
gaagagagtgactatgagagctctaagaacatgagttctggagatgacgacgatttcaac
ccctttagggatgagtctagtgaggatgacgaggatgatccctggttaatcagaaaagac
cacaagaaaaacaaagacaaaaaaaagaagaaaagcatagatccagattctattcaaagt
gccttattagcatcaggtcttggatcaaaacgacctagtttttcctccgcaccagttatt
tcacctgctcctaacagcgcatcagctaacagcaacaccaacagtaacagccttataaca
agtcaggatgctgtggaaagggcccagcagatgaagaaagacctactcgataaactggaa
aaattagcagaagacctccctcctaacaccctggatgaacttatcgatgaacttggtggc
cctgagaatgttgctgagatgactggccgaaaggggcgggttgtaagtaacgatgatgga
agtatatcttacgagtcaagatctgaacttgatgtgcctgtagaaatactaaatatcaca
gaaaaacaaaggtttatggatggagataagaatattgctatcatctcagaagctgccagc
tcaggtatttcattacaagcagatcggagagctaaaaatcaaagacgaagagttcatatg
accttggaattaccctggagtgctgatagagcaattcagcaatttgggcgaactcataga
tcaaaccaagttactgctccggaatatgtcttcctgatttctgaattggcaggagaacaa
agatttgcatctattgttgctaaaagacttgagagtttgggggcacttacgcatggtgac
agaagagcaacagaatctagagatttgagcaggttcaacttcgacaataagtatggaaga
aatgctttagaaattgtcatgaaatccattgtaaacctagattctcctatggtatcacca
cctccagactaccctggagaattctttaaagatgttcgacagggactgatcggtgttggc
ctgatcaatgtagaagatcgctcaggaattcttactcttgataaagattataacaacata
ggaaaattcttgaatagaattttgggcatggaggtacatcagcagaatgccttgtttcag
tattttgcggatacacttactgcagttgttcagaatgccaaaaaaaatggaagatacgat
atgggaatcttagatcttggttctggagatgagaaagtgaggaaaagtgatgttaagaag
tttctgactccagggtattcaacatctggccacgtagagttatacacgattagtgtagag
agggggatgtcctgggaggaagctaccaagatttgggctgagctgacaggaccggatgat
ggcttttacttgtcattgcaaataaggaacaacaagaaaactgccatcttagttaaagaa
gtgaatcctaaaaagaagcttttcttagtttatagaccaaatactgggaaacagctcaaa
ttagaaatttactctgatctaaaaaagaaatataagaaggtagcctctgatgatgccctg
atgcactggttagaccagtacaattcatctgcagatacttgtacccatgcttattggcgt
ggcaattgcaaaaaagcaagcttgggattagtttgtgaaataggccttcgctgccgcaca
tactatgtcttatgtggttccgtcctgagcgtctggacaaaagtcgaaggtgttctagca
tctgtcagtggcacaaacgtgaaaatgcagatagttcggctaagaacagaggacggacag
cggattgtaggtttgatcattccagccaattgcgtgtctcctctcgtaaacctcttgtcc
acttcagaccagtctcagcagcttgctgtccagcggaaacagctatggcagcagcatcac
ccacagagcatcaccaacttgagcaacgcataa
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