Trichechus manatus latirostris (Florida manatee): 101361480
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Entry
101361480 CDS
T05135
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101361480
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101361480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
TPR_Trm732_C
UTP20
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
101361480
NCBI-ProteinID:
XP_004369984
UniProt:
A0A2Y9D8P3
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPVPRTKQEPTSESSMEESSTTDRLNFDRFDICRLLQHGASLLG
SAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPAA
AALVNKQPTLQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSRDTVETNEKSNDSTDG
EPEEKRRKIANVVINQSANDSKVLIDNISDSSSLIEETNEWPLESFCEELCNDLFNPSWE
VRHGAGTGLREILKAHGKSGGKIGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVS
DEVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVR
QDVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVCLQTQKVPFIVNTLWDAL
LELDDLTASTNSIMTLLSSLLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALET
LFTLLSTQDQNSSSWLIPILPDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYIV
AAACPWMGAWLCLMMQPSHLPIDLNMLLEVKARTKEKAGGKVRQGQSQSKEVLQEYIAGA
DTIMEDPASRDFVVMRARMMAAKLLGALCCCICDPGVNMVTQEIKPAESLGQLLLFHLNS
KSALQRISVALVICEWAALQKECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQ
LISSLADAHIEVGNRVNHNVFTIDQANDLVTTVFNEVTSSFDLNPQVLQQLDGKRQQVQM
TVTETNQEWQLLQLRVHTFAACAVVSLQQLPDKLNPIIKPLMETIKKEENTLVQNYAAQC
IAKLLQQCTTRTPCPNSKIIKNLCSSLCVDPYLTPCVTCPVPTQSVQENSKGSNSEKDGM
HHTVTKHRGIITLYRHQKAAFAITSRRGPTPKAVKAQIADLPAGSSGNILVELDEAQKPY
LVQRRGAEFALTTIVKHFGDEMAVKLPHLWDAMVGPLRNTIDINNFDGKSLLEKGDGPAQ
ELVNSLQVFETAATSMDSELHPLLVQHLPHLYMCLQYPSTAVRHMTARCVGVMSKIATME
TMNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTD
SVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYKIPV
PINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSK
LAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIV
ASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNV
LELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFL
LRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAALSEETEKP
KLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAAQNSSLHDIQHAPKLSALK
QLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGS
IPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRA
HRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTL
DKDGKAEKADTSTSAKASMKSILENLSDLWDQEQYDSEYSLENFMHSLK
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccaggcttgatcgtctttttatcttactggatactggcactactccagtt
acaagaaaagctgctgcacagcaacttggagaagtggtgaagcttcatccccatgagcta
aataatctcttatctaaagtgttgatatatttaaggagtacaaattgggatacccggatt
gcagcaggacaagctgttgaagctatagtgaaaaatgtacctgagtggaatcctgtgcca
agaaccaaacaagaacctacttcagaaagttctatggaagagtcatctactacagatcga
ttgaattttgacagatttgatatatgtagattgttacaacatggggcatcgcttctgggg
tctgctggtgcagaatttgaagtccaagatgaaaaatcaggtgaagtggatcctaaagaa
aggatagcacgccaacgaaaactattacagaagaaacttggccttaatatgggagaagca
attggaatgagtactgaagaactattcaatgatgaagatttggattataccccagctgca
gcagcccttgtgaacaaacaacctactcttcaggcagctgaattgattgactcagaattt
cgagcaggaatgagcaatagacaaaagaacaaagctaaaagaatggccaagttatttgca
aaacagagatccagggatacagtggaaactaatgagaagagcaatgatagcactgacgga
gagccagaagaaaagagacggaaaatagcaaatgttgttattaatcagtctgcaaatgat
tccaaagtcttgattgataatatttcagacagctcttccttaattgaagagacaaatgaa
tggcctttggaaagcttttgcgaagaactttgtaatgatctttttaatccatcctgggag
gttcgacatggtgcaggcactggacttagggaaatccttaaagctcatgggaaaagtggt
ggtaaaatcggagacagcactttagaagagatgattcagcagcatcaagagtggttggaa
gacttggttattagacttctttgtgtttttgcgttagacagatttggagactttgtttct
gatgaagttgtggcaccagttcgtgaaacttgtgctcagacattaggtgtggtgttaaaa
cacatgaatgaaacaggcgttcataagactgtggatgtgctgcttaaattacttacacaa
gaacaatgggaagttagacatggtggtctgctgggaataaaatatgctttggcagttcgt
caggacgtaattaatactttattgcctaaagttttaactagaataattgaaggactccag
gaccttgatgatgatgtcagagctgttgcagcagcatcattagtgcctgtggtagaaagt
cttgtctgtcttcagacacaaaaggtacccttcattgtaaatacattatgggatgctctt
ctggaactagatgacctgacagcttcaacaaatagtattatgactcttctttcatccttg
ttaacttatcctcaggtccaacaatgcagtattcagcagtcactcacagttttagttcca
cgtgtctggccttttttgcatcacactatatcatcagttcgaagagcagcattggaaact
ctgtttacattattatcaacacaagaccagaactcttcatcttggctcatacctatcctg
cctgatatgctgcgacacatttttcagttttgtgttttagaaagcagccaggaaattctg
gacctcattcacaaggtttggatggaactgttaagcaaggcttcagtacaatacattgta
gcagctgcttgtccgtggatgggtgcttggctttgcttaatgatgcagccttctcattta
cctattgatttaaatatgttgctagaagtaaaagctagaaccaaggaaaaagcaggtggt
aaggtgcgccaaggccaaagccagagtaaagaagtacttcaggagtatatcgcaggtgca
gacactatcatggaagacccagcctccagggactttgtggttatgcgggccagaatgatg
gcagccaagttattaggagcactttgttgctgtatttgtgatccaggtgtaaatatggta
acccaggaaattaaaccagctgaatcccttggccagttactactcttccatttgaactcc
aaatctgctttacagaggattagcgttgctttggtaatctgtgaatgggctgctttacaa
aaggagtgtaaagctgttaccctagctgtgcagccacgtttacttgatatcctttcagaa
catttatattatgatgaaattgccgttccattcacacgaatgcagaatgaatgtaaacag
cttatttcatcattagctgatgcacatattgaagttggtaatagagtaaaccacaatgtt
tttacaatagatcaagctaatgacctggtcactactgtttttaatgaagtcacatcatct
tttgacttaaatcctcaagtgttacagcagttagatggtaaacgacagcaggtccaaatg
actgttacagagaccaaccaggagtggcaattgttgcagttgagagtgcatacgtttgca
gcctgtgcagttgtgagcttgcagcagcttccagataaattaaatcctatcataaaacca
ttgatggaaacgattaaaaaagaagagaatacactagtacaaaactatgcagctcagtgt
atagctaagctacttcagcagtgtacaacaaggacaccctgccccaattcaaagattatt
aaaaacctttgtagttcactttgtgtagacccatatctaactccttgtgtcacgtgtcca
gtaccaacacagagtgtccaggaaaattctaaaggctccaactcagaaaaagatggaatg
caccatactgtcacgaagcacagaggcataattacactctatagacatcagaaagctgct
tttgctatcacgagtaggcgaggtcctacccccaaagcagtcaaagctcaaatagcagat
cttcctgcaggaagtagtggaaatatccttgttgaacttgatgaggctcagaagccttat
cttgtacaacggagaggagctgaatttgccttgacaactatagtgaagcattttggtgat
gaaatggcagtaaagttgccacatctctgggatgctatggttggcccattgaggaataca
attgacataaataattttgatggaaagtccctcctggaaaagggagatggccctgcccaa
gaactggtgaattctctgcaagtttttgaaacagcagcaacttcaatggattctgagctt
catcctttgctggtacagcatctgcctcatctttatatgtgccttcagtatcccagcact
gcagtgagacacatgactgctcgttgtgtaggcgtcatgagcaaaatagctaccatggaa
acaatgaatatttttttggagaaagttcttccatggctgggagcaattgatgacaatgtc
aaacaagagggtgcaatagaagcacttgcctgtgtaatggaacaactggatgttggtatt
gttccatatattgtccttttagttgtgcctgtgttgggaagaatgagtgatcagacagac
agtgtaagattcatggctacacaatgctttgcaacgctaattagactcatgccacttgag
gcagggattccagaccctccaaacatgtcagaagaattaatccaattgaaagccaaggag
cggcactttttggagcaattgttagatgggaaaaaattagaaaattacaagattccagta
ccaatcaatgctgaactcagaaaatatcagcaggatggtgtgaactggttagcatttctt
aataagtacaaacttcatggaattctgtgtgatgacatgggtttgggaaaaactttacaa
tccatctgtatcttagcaggagatcattgtcacagggcccaggaatatgcacgatcaaaa
ttggcagaatgtatgccacttccttccttggtagtttgtccaccaacattaacaggtcat
tgggtggatgaagtaggtaaattttgctccagagaatatctaaatccactgcactataca
ggacctccaactgaaagaataaggttacagcatcaagtaaaaaggcacaatctgatagtg
gcttcatatgatgttgtgaggaatgacatagatttctttagaaatattaaatttaactac
tgtattcttgatgaaggccatgtcatcaaaaatggaaaaacaaagttgtcaaaagcagta
aaacaactgacagctaattacaggattattctttctggaacaccaatccagaacaacgtt
ttggagctgtggtcattatttgatttcctcatgccaggatttttgggtactgaacgtcag
tttgctgctcgatatggtaaacctatattagcaagtagggatgcgcgaagctccagccga
gaacaagaagcaggcgttcttgcaatggatgcacttcaccgccaagtactgccgtttctt
ttgagaagaatgaaagaagatgttttgcaagatcttccacccaaaattattcaagactat
tattgtactctcagtcctctccaggttcagctctatgaagattttgctaagtcccgcgcc
aagtgtgatgttgatgaaacagtttcttcagctgcactttctgaagaaactgaaaaacca
aagcttaaggctacaggccatgtattccaggcattacagtacttacgtaaactgtgcaac
catccagcattagtcttaacacctcaacatccagagttcaagagcactactgaaaaactg
gcagctcagaattcgtctcttcatgatattcaacatgcccctaaactctccgctttgaaa
caattgctgttggactgtggtttgggaaatggcagcacttcagagagtggtacagagtcc
gttgtggcccagcacaggatactgatcttctgtcagcttaaaagcatgcttgatatagta
gaacatgatctcctcaaacctcacttgccctctgtcacttatttgagattagatggcagc
atacctcctggtcagcggcattccattgtttcacggtttaacaatgatccatccatagac
gtcctcttacttacaactcacgttggtggcctggggcttaacttaacaggcgctgacaca
gtggtatttgtggagcacgactggaatcccatgcgagatctacaagccatggaccgagcc
catcgcattggacagaaacgcgtggttaacgtgtaccgattgataaccagaggaacactg
gaagagaaaataatgggtttgcagaaattcaagatgaacatagcgaatactgttattagc
caagagaattctagtttgcagagtatggggacggatcaacttcttgatctgtttactctt
gataaggatggtaaagcagaaaaagctgatacctctacttctgcaaaagcaagtatgaaa
tcaattcttgaaaacctgagtgatctttgggatcaagagcagtatgattcagagtacagc
ctggaaaattttatgcattctctcaagtaa
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integrated database retrieval system
